ENST00000522212.6 TVP23C-CDRT4
Information
- Transcript ID
- ENST00000522212.6
- Genome
- hg38
- Position
- chr17:15,436,021-15,563,561
- Strand
- -
- CDS length
- 495
- Amino acid length
- 165
- Gene symbol
- TVP23C-CDRT4
- Gene type
- protein-coding
- Gene description
- TVP23C-CDRT4 readthrough
- Gene Entrez Gene ID
- 100533496
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 15,436,021 | 15,438,200 |
| 6 | 15,440,208 | 15,440,285 |
| 5 | 15,545,785 | 15,545,916 |
| 4 | 15,547,059 | 15,547,148 |
| 3 | 15,553,685 | 15,553,829 |
| 2 | 15,555,282 | 15,555,364 |
| 1 | 15,563,437 | 15,563,561 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 15,440,253 | 15,440,285 |
| 5 | CDS | 15,545,785 | 15,545,916 |
| 4 | CDS | 15,547,059 | 15,547,148 |
| 3 | CDS | 15,553,685 | 15,553,829 |
| 2 | CDS | 15,555,282 | 15,555,364 |
| 1 | CDS | 15,563,437 | 15,563,448 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 15,339,338 | 15,466,875 | Link |
CDS sequence
ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAGACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCGTCTGTCTTCTCTGTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTTACAATTATCTTGTTGTTGTCGTGTGACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGATGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAATCAAGAATCTTTTGGTTGGGACTTATTGCCTGTTCAGTACTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCCTTCACAGTAAAGTGGCTGGAATCTGAACCTGTGATGTTAAGAAATCAGTAA
Amino sequence
MLQQDSNDDTEDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSSFITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACSVLWVIFAFSALFSFTVKWLESEPVMLRNQ*