ENST00000254816.6 TRIM47

Information
Transcript ID
ENST00000254816.6
Genome
hg19
Position
chr17:73,870,245-73,874,662
Strand
-
CDS length
1,917
Amino acid length
639
Gene symbol
TRIM47
Gene type
protein-coding
Gene description
tripartite motif containing 47
Gene Entrez Gene ID
91107
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 73,870,245 73,871,204
5 73,871,481 73,871,555
4 73,871,982 73,872,180
3 73,872,343 73,872,573
2 73,872,799 73,872,894
1 73,873,955 73,874,662
CDS
Exon number Type Start Stop
6 CDS 73,870,564 73,871,204
5 CDS 73,871,481 73,871,555
4 CDS 73,871,982 73,872,180
3 CDS 73,872,343 73,872,573
2 CDS 73,872,799 73,872,894
1 CDS 73,873,955 73,874,629
Other genome
Genome Chromosome Start End Links
hg38 chr17 75,874,164 75,878,581 Link
CDS sequence
ATGGACGGCAGTGGACCCTTCAGCTGCCCCATCTGCCTAGAGCCACTCCGGGAGCCGGTGACGCTGCCCTGCGGCCACAACTTCTGTCTCGCCTGCCTGGGCGCGCTCTGGCCGCATCGTGGCGCGAGTGGAGCCGGCGGACCCGGAGGCGCGGCCCGCTGCCCGCTGTGCCAGGAGCCCTTCCCCGACGGCCTTCAGCTCCGCAAGAACCACACGCTGTCCGAGCTGCTGCAGCTCCGCCAGGGCTCGGGCCCCGGGTCCGGCCCCGGCCCGGCCCCTGCCCTGGCCCCGGAGCCCTCGGCACCCAGCGCGCTGCCCAGTGTCCCGGAGCCGTCGGCCCCCTGCGCTCCCGAGCCGTGGCCCGCGGGCGAAGAGCCAGTGCGCTGCGACGCGTGCCCCGAGGGCGCGGCCCTGCCCGCCGCGCTGTCCTGCCTCTCCTGCCTCGCCTCCTTTTGCCCCGCGCACCTGGGCCCGCACGAGCGCAGCCCCGCCCTCCGCGGACACCGCCTGGTGCCGCCGCTGCGCCGGCTAGAGGAGAGCCTGTGCCCGCGCCACCTACGGCCGCTCGAGCGCTACTGCCGCGCGGAGCGCGTGTGTCTGTGCGAGGCCTGCGCCGCACAGGAGCACCGCGGCCACGAGCTGGTGCCGCTGGAGCAGGAGCGCGCGCTTCAGGAGGCTGAGCAGTCCAAAGTCCTGAGCGCCGTGGAGGACCGCATGGACGAGCTGGGTGCTGGCATTGCACAGTCCAGGCGCACAGTGGCCCTCATCAAGAGTGCAGCCGTAGCAGAGCGGGAGAGGGTGAGCCGGCTGTTTGCAGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCAGGTGCTGGGCTTCATCGAGGAGGGGGAAGCTGCCATGCTAGGCCGCTCCCAGGGTGACCTGCGGCGACAGGAGGAACAGCGCAGCCGCCTGAGCCGAGCCCGCCAGAATCTCAGCCAGGTCCCTGAAGCTGACTCAGTCAGCTTCCTGCAGGAGCTGCTGGCACTAAGGCTGGCCCTGGAGGATGGGTGTGGCCCTGGGCCTGGACCCCCGAGGGAGCTCAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGTGAGAGACATGCTGGCCGTGGCCTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGATGCTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAGGGACTATTTCCTCAAGTTTGCCTATATTGTGGATTTGGACAGCGACACAGCAGACAAGTTCCTGCAGCTGTTTGGAACCAAAGGTGTCAAGAGGGTGCTGTGTCCTATCAACTACCCCTTGTCGCCCACCCGCTTCACCCATTGTGAGCAGGTGCTGGGCGAGGGTGCCCTGGACCGAGGCACCTACTACTGGGAGGTGGAGATTATCGAGGGCTGGGTCAGCATGGGGGTCATGGCCGAAGACTTCTCCCCACAAGAGCCCTACGACCGCGGCCGGCTGGGCCGCAACGCCCACTCCTGCTGCCTGCAGTGGAATGGACGCAGCTTCTCCGTCTGGTTTCATGGGCTGGAGGCTCCCCTGCCCCACCCCTTCTCGCCCACGGTTGGGGTCTGCCTGGAATACGCTGACCGTGCCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGAAGGCCTCCCGGCCCCGCCGGGGTGGCATCCCGGCCTCCCCCATTGACCCCTTCCAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTTCACCCACAGACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTGAAGAGGAGGTGA
Amino sequence
MDGSGPFSCPICLEPLREPVTLPCGHNFCLACLGALWPHRGASGAGGPGGAARCPLCQEPFPDGLQLRKNHTLSELLQLRQGSGPGSGPGPAPALAPEPSAPSALPSVPEPSAPCAPEPWPAGEEPVRCDACPEGAALPAALSCLSCLASFCPAHLGPHERSPALRGHRLVPPLRRLEESLCPRHLRPLERYCRAERVCLCEACAAQEHRGHELVPLEQERALQEAEQSKVLSAVEDRMDELGAGIAQSRRTVALIKSAAVAERERVSRLFADAAAALQGFQTQVLGFIEEGEAAMLGRSQGDLRRQEEQRSRLSRARQNLSQVPEADSVSFLQELLALRLALEDGCGPGPGPPRELSFTKSSQAVRAVRDMLAVACVNQWEQLRGPGGNEDGPQKLDSEADAEPQDLESTNLLESEAPRDYFLKFAYIVDLDSDTADKFLQLFGTKGVKRVLCPINYPLSPTRFTHCEQVLGEGALDRGTYYWEVEIIEGWVSMGVMAEDFSPQEPYDRGRLGRNAHSCCLQWNGRSFSVWFHGLEAPLPHPFSPTVGVCLEYADRALAFYAVRDGKMSLLRRLKASRPRRGGIPASPIDPFQSRLDSHFAGLFTHRLKPAFFLESVDAHLQIGPLKKSCISVLKRR*