ENST00000545228.3 TSEN54

Information
Transcript ID
ENST00000545228.3
Genome
hg19
Position
chr17:73,512,629-73,520,774
Strand
+
CDS length
1,689
Amino acid length
563
Gene symbol
TSEN54
Gene type
protein-coding
Gene description
tRNA splicing endonuclease subunit 54
Gene Entrez Gene ID
283989
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 73,512,629 73,512,697
2 73,512,827 73,512,991
3 73,513,090 73,513,153
4 73,513,242 73,513,325
5 73,513,638 73,513,736
6 73,515,076 73,515,128
7 73,517,490 73,517,591
8 73,517,786 73,518,602
9 73,519,356 73,519,416
10 73,519,744 73,519,860
11 73,520,343 73,520,774
CDS
Exon number Type Start Stop
1 CDS 73,512,642 73,512,697
2 CDS 73,512,827 73,512,991
3 CDS 73,513,090 73,513,153
4 CDS 73,513,242 73,513,325
5 CDS 73,513,638 73,513,736
6 CDS 73,515,076 73,515,128
7 CDS 73,517,490 73,517,591
8 CDS 73,517,786 73,518,602
9 CDS 73,519,356 73,519,416
10 CDS 73,519,744 73,519,860
11 CDS 73,520,343 73,520,413
Other genome
Genome Chromosome Start End Links
hg38 chr17 75,516,548 75,524,693 Link
CDS sequence
ATGGAGCCCGAGCCCGAGCCCGCGGCCGTGGAGGTTCCCGCGGGGCGCGTGCTCAGCGCCCGGGAGCTCTTCGCCGCCCGCTCGCGGTCGCAGAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTTTCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGGCTGCGCCGGTGCCGGGAAGAGCTCTGGCAGCTGCTGGCAGAGCAGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCTGCCGAGTGGAGGCCAGAAGAGGGCTTCGTGGAGTTGAAGTCTCCCGCGGGCAAATTCTGGCAGACCATGGGCTTCTCAGAGCAGGGCCGGCAGCGCCTTCACCCGGAAGAGGCCTTGTATCTTCTGGAGTGTGGCTCCATCCACCTCTTCCACCAAGACCTGCCACTGTCTATCCAGGAAGCTTACCAGCTGCTGCTGACCGACCACACTGTGACCTTCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGGTTGGGTTATGTGGTTCGACGATTCCAACCAAGCTCTGTCCTGTCCCCGTATGAGAGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAGATGGCAAGAGAAAGAGGAGCAGCTCCAGCCCTCGGTCCATTAATAAGAAGGCCAAGGCCCTGGACAACTCCCTGCAACCCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCAGCCAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCCCAGGGGGCCCCTTTCAGCTTCTGGGGTCCCTGGGCCCCAGCCCTGGCCCGGCCAGGGAGGGGGTGGGGTGCAGCTGGGAGAGTGGCAGAGCCGAGAACGGAGTCACGGGAGCCGGTAAGCGGCGCTGGAACTTCGAGCAGATCTCCTTCCCCAACATGGCTTCAGACAGCCGCCACACCCTTCTGCGCGCCCCAGCCCCAGAGCTGCTCCCGGCCAACGTGGCTGGGCGGGAGACAGACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAGGCGGGAACGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCGGGCCCCTCACCTGTGGGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAGGTACCCCCTCAGCCTGCCACATCTTCGAGGGCCACTGGCAGCTGAGGAATCACAGGACTTTGGAAAGGGCATGGATGAACTGGGATGGATTGAGGCTTAAGGAAGATGTGGGAGGAGGGAGTGGACCCACAAGCACGGTCAGTTCTCCGGCGGCTGCAGCAGGGCCTGTGTGGGAAGGCTTAGAGATGCCGTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATGGAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAAACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGA
Amino sequence
MEPEPEPAAVEVPAGRVLSARELFAARSRSQKLPQRSHGPKDFLPDGSAAQAERLRRCREELWQLLAEQRVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLFHQDLPLSIQEAYQLLLTDHTVTFLQYQVFSHLKRLGYVVRRFQPSSVLSPYERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAEAAQFQEDVNADPEVQRCSSWREYKELLQRRQVQRSQRRAPHLWGQPVTPLLSPGQASSPGTPSACHIFEGHWQLRNHRTLERAWMNWDGLRLKEDVGGGSGPTSTVSSPAAAAGPVWEGLEMPWSFSISLCCRQHTFLMEVPGCWRSLGAWKSSLMFTRPTLWPHSERITLANPMPGCALVDLMSLSQTSAASSGCLTRVGMSL*