ENST00000344935.8 CPSF4L
Information
- Transcript ID
- ENST00000344935.8
- Genome
- hg19
- Position
- chr17:71,244,588-71,258,019
- Strand
- -
- CDS length
- 540
- Amino acid length
- 180
- Gene symbol
- CPSF4L
- Gene type
- protein-coding
- Gene description
- cleavage and polyadenylation specific factor 4 like
- Gene Entrez Gene ID
- 642843
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 71,244,588 | 71,244,675 |
| 5 | 71,248,769 | 71,248,862 |
| 4 | 71,250,070 | 71,250,165 |
| 3 | 71,253,820 | 71,253,972 |
| 2 | 71,257,072 | 71,257,122 |
| 1 | 71,257,855 | 71,258,019 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 71,244,633 | 71,244,675 |
| 5 | CDS | 71,248,769 | 71,248,862 |
| 4 | CDS | 71,250,070 | 71,250,165 |
| 3 | CDS | 71,253,820 | 71,253,972 |
| 2 | CDS | 71,257,072 | 71,257,122 |
| 1 | CDS | 71,257,855 | 71,257,957 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 73,248,449 | 73,261,880 | Link |
CDS sequence
ATGCAAGAGGTCATTGCGGGGCTAGAGCGGTTCACCTTTGCCTTCGAGAAGGATGTCGAGATGCAGAAGGGCACTGGGCTCCTGCCTTTCCAGGGCATGGACAAGTCGGCCTCAGCTGTGTGCAACTTCTTCACTAAAGGGCTCTGTGAGAAAGGGAAACTCTGCCCCTTCCGACATGACCGAGGGGAGAAGATGGTGGTATGCAAGCACTGGCTCCGGGGGCTCTGCAAGAAGGGTGATCACTGCAAGTTCCTGCACCAGTATGACCTCACCAGGATGCCTGAGTGCTACTTCTACTCCAAGTTTGGTGACTGCAGCAACAAGGAGTGTTCCTTCCTCCATGTGAAGCCAGCTTTCAAGTCCCAGGACTGTCCTTGGTATGACCAAGGTTTCTGCAAGGACGGTCCTCTGTGTAAATACCGCCATGTCCCCAGAATAATGTGTCTCAACTATTTAGTTGGCTTCTGCCCCGAGGGACCCAAGTGCCAATTTGCTCAGAAGATTCGGGAATTCAAGCTGCTGCCTGGAAGCAAGATCTAA
Amino sequence
MQEVIAGLERFTFAFEKDVEMQKGTGLLPFQGMDKSASAVCNFFTKGLCEKGKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNYLVGFCPEGPKCQFAQKIREFKLLPGSKI*