ENST00000438387.6 CSHL1

Information
Transcript ID
ENST00000438387.6
Genome
hg19
Position
chr17:61,986,965-61,988,596
Strand
-
CDS length
420
Amino acid length
140
Gene symbol
CSHL1
Gene type
protein-coding
Gene description
chorionic somatomammotropin hormone like 1
Gene Entrez Gene ID
1444
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 61,986,965 61,987,268
3 61,987,522 61,987,686
2 61,987,780 61,987,826
1 61,988,547 61,988,596
CDS
Exon number Type Start Stop
4 CDS 61,987,071 61,987,268
3 CDS 61,987,522 61,987,686
2 CDS 61,987,780 61,987,826
1 CDS 61,988,547 61,988,556
Other genome
Genome Chromosome Start End Links
hg38 chr17 63,909,605 63,911,236 Link
CDS sequence
ATGGCTGCAGACTCTATTCCGACATCCTCCAACATGGAGGAAACGCAGCAGAAATCCAACTTAGAGCTGCTCCACATCTCCCTGCTGCTCATCGAGTCGCGGCTGGAGCCCGTGCGGTTCCTCAGGAGTACCTTCACCAACAACCTGGTGTATGACACCTCGGACAGCGATGACTATCACCTCCTAAAGGACCTAGAGGAAGGCATCCAAATGCTGATGGGGAGGCTGGAAGACGGCAGCCACCTGACTGGGCAGACCCTCAAGCAGACCTACAGCAAGTTTGACACAAACTCGCACAACCATGACGCACTGCTCAAGAACTACGGGCTGCTCCACTGCTTCAGGAAGGACATGGACAAGGTCGAGACATTCCTGCGCATGGTGCAGTGCCGCTCTGTGGAGGGCAGCTGTGGCTTCTAG
Amino sequence
MAADSIPTSSNMEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVEGSCGF*