ENST00000225726.10 CCDC47

Information
Transcript ID
ENST00000225726.10
Genome
hg19
Position
chr17:61,822,615-61,850,957
Strand
-
CDS length
1,452
Amino acid length
484
Gene symbol
CCDC47
Gene type
protein-coding
Gene description
coiled-coil domain containing 47
Gene Entrez Gene ID
57003
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
13 61,822,615 61,824,321
12 61,829,300 61,829,467
11 61,829,680 61,829,789
10 61,830,101 61,830,159
9 61,831,793 61,831,878
8 61,833,600 61,833,710
7 61,833,829 61,833,930
6 61,838,274 61,838,339
5 61,838,590 61,838,711
4 61,841,376 61,841,550
3 61,842,100 61,842,207
2 61,843,272 61,843,554
1 61,850,772 61,850,957
CDS
Exon number Type Start Stop
13 CDS 61,824,241 61,824,321
12 CDS 61,829,300 61,829,467
11 CDS 61,829,680 61,829,789
10 CDS 61,830,101 61,830,159
9 CDS 61,831,793 61,831,878
8 CDS 61,833,600 61,833,710
7 CDS 61,833,829 61,833,930
6 CDS 61,838,274 61,838,339
5 CDS 61,838,590 61,838,711
4 CDS 61,841,376 61,841,550
3 CDS 61,842,100 61,842,207
2 CDS 61,843,272 61,843,535
Other genome
Genome Chromosome Start End Links
hg38 chr17 63,745,255 63,773,597 Link
CDS sequence
ATGAAAGCCTTCCACACTTTCTGTGTTGTCCTTCTGGTGTTTGGGAGTGTCTCTGAAGCCAAGTTTGATGATTTTGAGGATGAGGAGGACATAGTAGAGTATGATGATAATGACTTCGCTGAATTTGAGGATGTCATGGAAGACTCTGTTACTGAATCTCCTCAACGGGTCATAATCACTGAAGATGATGAAGATGAGACCACTGTGGAGTTGGAAGGGCAGGATGAAAACCAAGAAGGAGATTTTGAAGATGCAGATACCCAGGAGGGAGATACTGAGAGTGAACCATATGATGATGAAGAATTTGAAGGTTATGAAGACAAACCAGATACTTCTTCTAGCAAAAATAAAGACCCAATAACGATTGTTGATGTTCCTGCACACCTCCAGAACAGCTGGGAGAGTTATTATCTAGAAATTTTGATGGTGACTGGTCTGCTTGCTTATATCATGAATTACATCATTGGGAAGAATAAAAACAGTCGCCTTGCACAGGCCTGGTTTAACACTCATAGGGAGCTTTTGGAGAGCAACTTTACTTTAGTGGGGGATGATGGAACTAACAAAGAAGCCACAAGCACAGGAAAGTTGAACCAGGAGAATGAGCACATCTATAACCTGTGGTGTTCTGGTCGAGTGTGCTGTGAGGGCATGCTTATCCAGCTGAGGTTCCTCAAGAGACAAGACTTACTGAATGTCCTGGCCCGGATGATGAGGCCAGTGAGTGATCAAGTGCAAATAAAAGTAACCATGAATGATGAAGACATGGATACCTACGTATTTGCTGTTGGCACACGGAAAGCCTTGGTGCGACTACAGAAAGAGATGCAGGATTTGAGTGAGTTTTGTAGTGATAAACCTAAGTCTGGAGCAAAGTATGGACTGCCGGACTCTTTGGCCATCCTGTCAGAGATGGGAGAAGTCACAGACGGAATGATGGATACAAAGATGGTTCACTTTCTTACACACTATGCTGACAAGATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGTCCAAAAATTATGCAAGAGGAAGGTCAGCCTTTAAAGCTACCTGACACTAAGAGGACACTGTTGTTTACATTTAATGTGCCTGGCTCAGGTAACACTTACCCAAAGGATATGGAGGCACTGCTACCCCTGATGAACATGGTGATTTATTCTATTGATAAAGCCAAAAAGTTCCGACTCAACAGAGAAGGCAAACAAAAAGCAGATAAGAACCGTGCCCGAGTAGAAGAGAACTTCTTGAAACTGACACATGTGCAAAGACAGGAAGCAGCACAGTCTCGGCGGGAGGAGAAAAAAAGAGCAGAGAAGGAGCGAATCATGAATGAGGAAGATCCTGAGAAACAGCGCAGGCTGGAGGAGGCTGCATTGAGGCGTGAGCAAAAGAAGTTGGAAAAGAAGCAAATGAAAATGAAACAAATCAAAGTGAAAGCCATGTAA
Amino sequence
MKAFHTFCVVLLVFGSVSEAKFDDFEDEEDIVEYDDNDFAEFEDVMEDSVTESPQRVIITEDDEDETTVELEGQDENQEGDFEDADTQEGDTESEPYDDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNTHRELLESNFTLVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLRFLKRQDLLNVLARMMRPVSDQVQIKVTMNDEDMDTYVFAVGTRKALVRLQKEMQDLSEFCSDKPKSGAKYGLPDSLAILSEMGEVTDGMMDTKMVHFLTHYADKIESVHFSDQFSGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKKLEKKQMKMKQIKVKAM*