ENST00000578402.5 LIMD2

Information
Transcript ID
ENST00000578402.5
Genome
hg19
Position
chr17:61,775,176-61,778,045
Strand
-
CDS length
384
Amino acid length
128
Gene symbol
LIMD2
Gene type
protein-coding
Gene description
LIM domain containing 2
Gene Entrez Gene ID
80774
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 61,775,176 61,776,071
4 61,776,159 61,776,298
3 61,776,388 61,776,429
2 61,776,617 61,776,755
1 61,777,729 61,778,045
CDS
Exon number Type Start Stop
5 CDS 61,775,912 61,776,071
4 CDS 61,776,159 61,776,298
3 CDS 61,776,388 61,776,429
2 CDS 61,776,617 61,776,658
Other genome
Genome Chromosome Start End Links
hg38 chr17 63,697,816 63,700,685 Link
CDS sequence
ATGTTCCAGGCTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCAAGTCCTTCAGCCTGCGGGCCCAGGTGAAGGAGACCTGCGCCGCCTGCCAGAAGACCGTGTACCCCATGGAGCGGCTGGTGGCCGACAAGCTCATTTTCCACAACTCTTGCTTCTGCTGCAAGCACTGTCACACCAAGCTCAGCCTGGGCAGCTACGCCGCGCTGCACGGGGAGTTCTACTGCAAACCCCACTTCCAGCAGCTGTTTAAGAGCAAAGGCAACTACGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGA
Amino sequence
MFQAAGAAQATPSHDAKGGGSSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDEGFGRKQHKELWAHKEVDPGTKTA*