ENST00000251241.9 DHX40

Information
Transcript ID
ENST00000251241.9
Genome
hg19
Position
chr17:57,642,971-57,685,706
Strand
+
CDS length
2,340
Amino acid length
780
Gene symbol
DHX40
Gene type
protein-coding
Gene description
DEAH-box helicase 40
Gene Entrez Gene ID
79665
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 57,642,971 57,643,144
2 57,643,988 57,644,155
3 57,647,879 57,648,024
4 57,650,477 57,650,596
5 57,651,101 57,651,328
6 57,651,549 57,651,615
7 57,652,701 57,652,832
8 57,654,627 57,654,726
9 57,656,833 57,656,919
10 57,657,058 57,657,240
11 57,663,514 57,663,594
12 57,665,257 57,665,414
13 57,676,098 57,676,212
14 57,676,736 57,676,844
15 57,679,883 57,679,977
16 57,682,476 57,682,545
17 57,682,807 57,683,035
18 57,684,394 57,685,706
CDS
Exon number Type Start Stop
1 CDS 57,643,033 57,643,144
2 CDS 57,643,988 57,644,155
3 CDS 57,647,879 57,648,024
4 CDS 57,650,477 57,650,596
5 CDS 57,651,101 57,651,328
6 CDS 57,651,549 57,651,615
7 CDS 57,652,701 57,652,832
8 CDS 57,654,627 57,654,726
9 CDS 57,656,833 57,656,919
10 CDS 57,657,058 57,657,240
11 CDS 57,663,514 57,663,594
12 CDS 57,665,257 57,665,414
13 CDS 57,676,098 57,676,212
14 CDS 57,676,736 57,676,844
15 CDS 57,679,883 57,679,977
16 CDS 57,682,476 57,682,545
17 CDS 57,682,807 57,683,035
18 CDS 57,684,394 57,684,533
Other genome
Genome Chromosome Start End Links
hg38 chr17 59,565,610 59,608,345 Link
CDS sequence
ATGTCCCGGTTTCCCGCAGTCGCGGGCAGGGCGCCAAGGCGGCAGGAGGAGGGTGAGCGGTCAAGAGACCTCCAGGAAGAGCGGCTCTCGGCTGTTTGCATCGCCGATAGAGAAGAGAAAGGATGCACGTCCCAGGAGGGAGGAACTACTCCAACTTTTCCTATTCAGAAACAAAGAAAAAAGATTATTCAAGCTGTGAGGGACAATTCATTCCTTATTGTTACTGGAAATACAGGAAGTGGTAAAACAACTCAACTCCCAAAATATCTATATGAAGCAGGGTTTTCACAACATGGTATGATTGGTGTAACTCAACCACGAAAAGTAGCTGCTATATCAGTTGCTCAGAGAGTAGCTGAAGAAATGAAATGCACTTTGGGATCCAAAGTAGGATACCAAGTTCGTTTTGATGATTGCAGTTCTAAGGAGACAGCAATCAAATATATGACTGATGGATGTTTACTGAAACATATTCTGGGAGACCCAAATCTTACCAAATTCAGTGTCATTATTTTGGATGAAGCCCATGAAAGAACTCTAACTACAGATATCTTATTTGGTTTATTGAAGAAGCTATTTCAGGAGAAGTCTCCTAATAGGAAGGAGCATTTAAAAGTGGTGGTAATGTCAGCAACTATGGAATTAGCCAAGCTCTCTGCATTCTTTGGAAATTGTCCAATATTTGATATACCTGGAAGGCTTTATCCAGTCAGAGAGAAATTCTGCAATTTGATTGGTCCACGAGACAGAGAAAATACTGCGTATATTCAAGCGATTGTGAAAGTCACCATGGATATCCATTTGAATGAAATGGCTGGAGACATCTTGGTTTTTCTGACTGGCCAGTTTGAAATAGAAAAAAGTTGTGAGTTACTTTTTCAGATGGCAGAGTCTGTTGATTATGATTATGATGTTCAAGATACCACCCTCGATGGCTTGTTAATATTGCCGTGTTATGGATCAATGACAACAGATCAACAGAGGAGGATATTTTTGCCACCACCACCTGGAATTAGAAAATGTGTCATATCCACCAATATTTCTGCAACGTCTTTGACAATAGATGGAATCAGATATGTGGTAGATGGTGGCTTCGTGAAGCAGTTAAATCACAACCCCAGATTAGGGTTGGACATCCTGGAGGTGGTTCCAATTTCAAAGAGCGAGGCATTACAGCGAAGTGGCCGAGCTGGCAGGACTTCTTCAGGAAAATGCTTTCGGATCTATAGTAAAGATTTTTGGAACCAGTGTATGCCTGACCATGTGATCCCTGAAATTAAGAGAACTAGTTTGACATCTGTAGTTCTGACCTTAAAGTGCCTTGCCATACACGATGTCATAAGGTTTCCCTATTTGGATCCACCTAATGAGAGACTTATTTTAGAAGCTCTTAAACAACTTTACCAGTGTGATGCTATTGACAGGAGTGGCCATGTCACCAGATTGGGTTTGTCTATGGTGGAGTTTCCTTTGCCTCCACATCTGACATGTGCAGTAATAAAAGCTGCTTCCCTGGATTGTGAAGATCTACTACTTCCAATAGCAGCAATGTTGTCTGTGGAAAACGTCTTCATTAGACCTGTTGATCCAGAGTACCAGAAGGAAGCAGAACAGAGACATCGAGAATTGGCAGCTAAAGCTGGAGGATTTAATGACTTTGCAACTTTAGCTGTCATCTTTGAACAATGCAAATCAAGTGGAGCTCCAGCTTCATGGTGCCAAAAACACTGGATTCATTGGAGGTGCTTATTTTCTGCATTTCGTGTGGAAGCTCAACTTCGAGAACTAATCAGGAAGCTTAAACAGCAAAGTGATTTCCCAAAAGAGACCTTTGAAGGCCCTAAACATGAAGTACTACGAAGATGTCTTTGTGCGGGCTATTTCAAAAATGTAGCTCGAAGATCTGTTGGGAGAACGTTTTGCACAATGGATGGTCGTGGAAGCCCAGTTCACATTCATCCTTCCTCAGCACTTCATGAACAGGAAACCAAACTTGAATGGATCATTTTTCATGAGGTATTGGTTACCACCAAAGTCTACGCAAGAATTGTATGCCCAATCCGTTATGAATGGGTAAGAGACTTGTTACCCAAGTTGCATGAATTTAATGCACATGATTTGAGCAGTGTGGCCCGACGTGAAGTGAGAGAAGATGCAAGAAGGAGATGGACAAATAAGGAAAATGTAAAGCAGCTAAAGGATGGAATATCGAAAGACGTCTTAAAGAAAATGCAAAGAAGAAATGATGACAAATCCATATCTGATGCACGGGCTCGTTTCCTTGAGAGAAAGCAGCAGAGGACCCAGGACCACAGTGACACACGAAAGGAAACAGGCTAA
Amino sequence
MSRFPAVAGRAPRRQEEGERSRDLQEERLSAVCIADREEKGCTSQEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNKENVKQLKDGISKDVLKKMQRRNDDKSISDARARFLERKQQRTQDHSDTRKETG*