ENST00000300917.10 SMG8

Information
Transcript ID
ENST00000300917.10
Genome
hg19
Position
chr17:57,287,396-57,292,591
Strand
+
CDS length
2,976
Amino acid length
992
Gene symbol
SMG8
Gene type
protein-coding
Gene description
SMG8 nonsense mediated mRNA decay factor
Gene Entrez Gene ID
55181
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 57,287,396 57,289,171
2 57,289,702 57,289,847
3 57,290,090 57,290,962
4 57,292,166 57,292,591
CDS
Exon number Type Start Stop
1 CDS 57,287,413 57,289,171
2 CDS 57,289,702 57,289,847
3 CDS 57,290,090 57,290,962
4 CDS 57,292,166 57,292,363
Other genome
Genome Chromosome Start End Links
hg38 chr17 59,210,035 59,215,230 Link
CDS sequence
ATGGCTGGTCCCGTGAGCTTGCGAGACCTTCTAATGGGAGCATCAGCCTGGATGGGCTCTGAAAGTCCCGGAGGGTCCCCTACTGAGGGCGGAGGGAGCGCGGCTGGCGGACCGGAGCCTCCATGGCGGGAGGATGAGATCTGCGTTGTGGGAATCTTCGGCAAGACGGCTCTACGCCTGAATTCCGAGAAGTTCTCTCTTGTGAATACGGTGTGCGACCGACAGGTCTTTCCTCTCTTTCGCCACCAAGATCCTGGGGATCCAGGACCTGGAATCAGAACTGAGGCTGGCGCCGTGGGTGAGGCCGGTGGAGCCGAGGACCCTGGGGCTGCAGCCGGGGGTTCAGTTCGGGGAAGTGGAGCTGTCGCGGAAGGTAACCGAACTGAGGCAGGCTCCCAGGACTACAGCCTTCTGCAGGCCTACTACAGTCAGGAAAGCAAAGTTCTGTATCTTCTCCTCACCTCCATCTGTGACAATTCACAGCTTCTCCGGGCTTGTCGGGCTCTTCAGAGCGGGGAAGCTGGAGGTGGACTCTCTTTACCTCATGCAGAAGCACACGAGTTCTGGAAGCATCAAGAGAAGCTGCAGTGCCTCAGTCTCCTTTACCTATTCTCTGTCTGTCATATCTTGCTTCTGGTCCATCCCACTTGTTCCTTTGATATCACTTATGATCGAGTATTCAGAGCCCTGGATGGGCTGAGACAGAAGGTCCTGCCGCTCCTTAAAACAGCCATTAAGGATTGTCCAGTTGGCAAAGACTGGAAGCTAAACTGCCGACCTTGCCCACCTAGACTCCTTTTCCTCTTTCAACTCAATGGAGCCCTCAAGGTAGAACCTCCTCGGAACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAAAGGAGGCTGCAGCATGCCCTGGAGGACCAGATCTATAGAATCTTCCGGAAGAGTCGTGTCTTGACTAATCAGAGCATCAACTGCCTCTTTACTGTGCCTGCCAACCAAGCTTTCGTGTACATAGTACCGGGAAGCCAGGAGGAGGACCCAGTAGGTATGTTGCTGGACCAACTTAGGAGTCATTGTACTGTGAAGGACCCGGAATCTTTGCTGGTGCCTGCACCCCTTTCTGGGCCTAGGCGATACCAGGTGATGAGGCAGCACAGCCGACAACAACTTTCCTTTCACATTGACAGCAGCAGTTCCAGTTCTTCAGGCCAGCTAGTGGATTTCACTCTTCGGGAATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCAAGAAAGGTTTCGATGACAGTGTGGGCAGGAACCCACAGCCTTCCCATTTTGAACTTCCTACTTATCAGAAGTGGATCTCAGCAGCTTCAAAACTGTATGAGGTGGCTATTGATGGGAAAGAAGAGGACTTGGGGTCACCCACTGGAGAGCTAACATCTAAGATTTTAAGCAGTATTAAAGTCTTGGAAGGATTTTTGGATATTGACACAAAATTCTCAGAAAACCGATGCCAAAAAGCTTTACCCATGGCCCACAGTGCCTACCAGTCAAATTTGCCTCATAATTACACAATGACTGTCCATAAGAATCAGCTTGCCCAGGCTCTTCGAGTGTACAGTCAACATGCTAGAGGTCCAGCATTTCACAAATACGCCATGCAGTTACATGAGGACTGCTACAAATTTTGGAGCAATGGCCATCAGCTCTGTGAGGAGAGGAGTTTAACTGATCAACACTGTGTGCACAAATTTCACTCATTACCTAAATCAGGAGAAAAACCAGAGGCTGATAGAAATCCGCCTGTGCTATATCACAATAGCCGAGCTCGATCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGAGATGATCCCTTTGATATCAAAGCAGCCAATTATGACTTCTATCAGCTTCTGGAAGAAAAGTGTTGTGGAAAATTGGATCATATCAATTTCCCAGTATTTGAACCAAGTACTCCAGATCCTGCTCCTGCTAAAAATGAATCCTCTCCTGCTCCTCCAGATTCGGATGCTGATAAACTTAAAGAAAAAGAACCTCAAACCCAAGGAGAGAGCACGAGCCTGAGTTTAGCTTTGAGTTTGGGCCAATCCACAGATAGCTTAGGTACCTATCCAGCTGATCCACAAGCAGGAGGAGATAATCCAGAAGTTCATGGTCAAGTAGAAGTGAAAACTGAGAAGAGGCCAAACTTCGTTGATCGACAGGCATCCACAGTTGAGTATCTCCCAGGCATGCTACATTCAAATTGCCCTAAAGGTCTCCTACCCAAATTCTCCAGCTGGTCTTTGGTTAAACTAGGCCCTGCTAAGTCTTATAACTTTCATACAGGTTTGGACCAACAGGGCTTTATTCCAGGAACAAATTATCTTATGCCTTGGGACATTGTCATCAGGACTAGAGCTGAAGATGAAGGAGACTTAGACACAAACTCTTGGCCTGCTCCAAATAAAGCTATTCCTGGAAAGAGAAGTGCGGTTGTAATGGGAAGAGGAAGACGGCGAGATGACATAGCTCGAGCTTTTGTGGGCTTTGAATATGAAGACTCTCGAGGTCGGAGATTCATGTGCTCTGGGCCTGACAAAGTAATGAAAGTAATGGGAAGTGGGCCAAAGGAATCAGCTTTAAAAGCCCTAAATAGTGACATGCCCTTATATATTCTGTCATCCTCTCAAGGTAGAGGGCTGAAACCTCATTATGCTCAACTTATGAGGCTTTTTGTTGTGGTTCCTGATGCTCCTTTGCAGATAATACTAATGCCTCAGGTTCAGCCAGGCCCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAAATCACCCTTCCACCTGATGGCCTTTGGGTTTTGAGATTTCCTTATGCATATGTGACTGAGAGAGGACCTTGTTTCCCCCCTAAGGAAAATGTGCAGTTAATGAGCTACAAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAA
Amino sequence
MAGPVSLRDLLMGASAWMGSESPGGSPTEGGGSAAGGPEPPWREDEICVVGIFGKTALRLNSEKFSLVNTVCDRQVFPLFRHQDPGDPGPGIRTEAGAVGEAGGAEDPGAAAGGSVRGSGAVAEGNRTEAGSQDYSLLQAYYSQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSLPHAEAHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRNQDPAHPDKPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPVGMLLDQLRSHCTVKDPESLLVPAPLSGPRRYQVMRQHSRQQLSFHIDSSSSSSSGQLVDFTLREFLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDLGSPTGELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDPAPAKNESSPAPPDSDADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGDNPEVHGQVEVKTEKRPNFVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNFHTGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRRRDDIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQGRGLKPHYAQLMRLFVVVPDAPLQIILMPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRFPYAYVTERGPCFPPKENVQLMSYKVLRGVLKAVTQ*