ENST00000578922.1 SMG8

Information
Transcript ID
ENST00000578922.1
Genome
hg19
Position
chr17:57,287,228-57,289,405
Strand
+
CDS length
1,767
Amino acid length
589
Gene symbol
SMG8
Gene type
protein-coding
Gene description
SMG8 nonsense mediated mRNA decay factor
Gene Entrez Gene ID
55181
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 57,287,228 57,289,405
CDS
Exon number Type Start Stop
1 CDS 57,287,413 57,289,179
Other genome
Genome Chromosome Start End Links
hg38 chr17 59,209,867 59,212,044 Link
CDS sequence
ATGGCTGGTCCCGTGAGCTTGCGAGACCTTCTAATGGGAGCATCAGCCTGGATGGGCTCTGAAAGTCCCGGAGGGTCCCCTACTGAGGGCGGAGGGAGCGCGGCTGGCGGACCGGAGCCTCCATGGCGGGAGGATGAGATCTGCGTTGTGGGAATCTTCGGCAAGACGGCTCTACGCCTGAATTCCGAGAAGTTCTCTCTTGTGAATACGGTGTGCGACCGACAGGTCTTTCCTCTCTTTCGCCACCAAGATCCTGGGGATCCAGGACCTGGAATCAGAACTGAGGCTGGCGCCGTGGGTGAGGCCGGTGGAGCCGAGGACCCTGGGGCTGCAGCCGGGGGTTCAGTTCGGGGAAGTGGAGCTGTCGCGGAAGGTAACCGAACTGAGGCAGGCTCCCAGGACTACAGCCTTCTGCAGGCCTACTACAGTCAGGAAAGCAAAGTTCTGTATCTTCTCCTCACCTCCATCTGTGACAATTCACAGCTTCTCCGGGCTTGTCGGGCTCTTCAGAGCGGGGAAGCTGGAGGTGGACTCTCTTTACCTCATGCAGAAGCACACGAGTTCTGGAAGCATCAAGAGAAGCTGCAGTGCCTCAGTCTCCTTTACCTATTCTCTGTCTGTCATATCTTGCTTCTGGTCCATCCCACTTGTTCCTTTGATATCACTTATGATCGAGTATTCAGAGCCCTGGATGGGCTGAGACAGAAGGTCCTGCCGCTCCTTAAAACAGCCATTAAGGATTGTCCAGTTGGCAAAGACTGGAAGCTAAACTGCCGACCTTGCCCACCTAGACTCCTTTTCCTCTTTCAACTCAATGGAGCCCTCAAGGTAGAACCTCCTCGGAACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAAAGGAGGCTGCAGCATGCCCTGGAGGACCAGATCTATAGAATCTTCCGGAAGAGTCGTGTCTTGACTAATCAGAGCATCAACTGCCTCTTTACTGTGCCTGCCAACCAAGCTTTCGTGTACATAGTACCGGGAAGCCAGGAGGAGGACCCAGTAGGTATGTTGCTGGACCAACTTAGGAGTCATTGTACTGTGAAGGACCCGGAATCTTTGCTGGTGCCTGCACCCCTTTCTGGGCCTAGGCGATACCAGGTGATGAGGCAGCACAGCCGACAACAACTTTCCTTTCACATTGACAGCAGCAGTTCCAGTTCTTCAGGCCAGCTAGTGGATTTCACTCTTCGGGAATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCAAGAAAGGTTTCGATGACAGTGTGGGCAGGAACCCACAGCCTTCCCATTTTGAACTTCCTACTTATCAGAAGTGGATCTCAGCAGCTTCAAAACTGTATGAGGTGGCTATTGATGGGAAAGAAGAGGACTTGGGGTCACCCACTGGAGAGCTAACATCTAAGATTTTAAGCAGTATTAAAGTCTTGGAAGGATTTTTGGATATTGACACAAAATTCTCAGAAAACCGATGCCAAAAAGCTTTACCCATGGCCCACAGTGCCTACCAGTCAAATTTGCCTCATAATTACACAATGACTGTCCATAAGAATCAGCTTGCCCAGGCTCTTCGAGTGTACAGTCAACATGCTAGAGGTCCAGCATTTCACAAATACGCCATGCAGTTACATGAGGACTGCTACAAATTTTGGAGCAATGGCCATCAGCTCTGTGAGGAGAGGAGTTTAACTGATCAACACTGTGTGCACAAATTTCACTCATTACCTAAATCAGGTAGCTAA
Amino sequence
MAGPVSLRDLLMGASAWMGSESPGGSPTEGGGSAAGGPEPPWREDEICVVGIFGKTALRLNSEKFSLVNTVCDRQVFPLFRHQDPGDPGPGIRTEAGAVGEAGGAEDPGAAAGGSVRGSGAVAEGNRTEAGSQDYSLLQAYYSQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSLPHAEAHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRNQDPAHPDKPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPVGMLLDQLRSHCTVKDPESLLVPAPLSGPRRYQVMRQHSRQQLSFHIDSSSSSSSGQLVDFTLREFLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDLGSPTGELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGS*