ENST00000583380.5 SKA2

Information
Transcript ID
ENST00000583380.5
Genome
hg19
Position
chr17:57,189,452-57,232,535
Strand
-
CDS length
330
Amino acid length
110
Gene symbol
SKA2
Gene type
protein-coding
Gene description
spindle and kinetochore associated complex subunit 2
Gene Entrez Gene ID
348235
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 57,189,452 57,189,706
3 57,196,660 57,196,856
2 57,208,642 57,208,728
1 57,232,492 57,232,535
CDS
Exon number Type Start Stop
4 CDS 57,189,694 57,189,706
3 CDS 57,196,660 57,196,856
2 CDS 57,208,642 57,208,728
1 CDS 57,232,492 57,232,524
Other genome
Genome Chromosome Start End Links
hg38 chr17 59,112,091 59,155,174 Link
CDS sequence
ATGGAGGCGGAGGTCGATAAGCTGGAACTGATGTTCCAGAAAGCTGAGTCTGATCTGGATTACATTCAATACAGGCTGGAATATGAAATCAAGACTAATCATCCTGATTCAGCAAGTGAGAAAAATCCAGTTACACTCTTAAAGGAATTGTCAGTGATAAAGTCTCGATATCAAACTTTGTATGCCCGCTTTAAACCAGTTGCTGTTGAGCAGAAAGAGAGTAAGAGCCGCATTTGTGCTACTGTGAAAAAGACTATGAATATGATACAAAAACTACAGAAGCAAACAGACCTGGAGGTAATGCTTTCAGTTGACAGCTGTCACCACTGA
Amino sequence
MEAEVDKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTLYARFKPVAVEQKESKSRICATVKKTMNMIQKLQKQTDLEVMLSVDSCHH*