ENST00000578105.1 SKA2

Information
Transcript ID
ENST00000578105.1
Genome
hg19
Position
chr17:57,189,249-57,232,545
Strand
-
CDS length
279
Amino acid length
93
Gene symbol
SKA2
Gene type
protein-coding
Gene description
spindle and kinetochore associated complex subunit 2
Gene Entrez Gene ID
348235
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 57,189,249 57,189,706
2 57,196,680 57,196,856
1 57,232,492 57,232,545
CDS
Exon number Type Start Stop
3 CDS 57,189,638 57,189,706
2 CDS 57,196,680 57,196,856
1 CDS 57,232,492 57,232,524
Other genome
Genome Chromosome Start End Links
hg38 chr17 59,111,888 59,155,184 Link
CDS sequence
ATGGAGGCGGAGGTCGATAAGCTGGAACTGATGAAAAATCCAGTTACACTCTTAAAGGAATTGTCAGTGATAAAGTCTCGATATCAAACTTTGTATGCCCGCTTTAAACCAGTTGCTGTTGAGCAGAAAGAGAGTAAGAGCCGCATTTGTGCTACTGTGAAAAAGACTATGAATATGATACAAAAACTACAGAAGCAAACAGACCTGGAGCTGTCACCACTGACTAAAGAAGAGAAAACTGCGGCAGAGCAATTCAAATTTCACATGCCAGATTTATGA
Amino sequence
MEAEVDKLELMKNPVTLLKELSVIKSRYQTLYARFKPVAVEQKESKSRICATVKKTMNMIQKLQKQTDLELSPLTKEEKTAAEQFKFHMPDL*