ENST00000504681.5 B4GALNT2

Information
Transcript ID
ENST00000504681.5
Genome
hg19
Position
chr17:47,209,822-47,247,351
Strand
+
CDS length
1,443
Amino acid length
481
Gene symbol
B4GALNT2
Gene type
protein-coding
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)
Gene Entrez Gene ID
124872
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 47,209,822 47,209,872
2 47,218,609 47,218,809
3 47,219,397 47,219,534
4 47,230,162 47,230,268
5 47,233,928 47,233,965
6 47,236,399 47,236,579
7 47,237,917 47,238,003
8 47,241,450 47,241,637
9 47,243,476 47,243,616
10 47,246,043 47,246,262
11 47,246,885 47,247,351
CDS
Exon number Type Start Stop
2 CDS 47,218,673 47,218,809
3 CDS 47,219,397 47,219,534
4 CDS 47,230,162 47,230,268
5 CDS 47,233,928 47,233,965
6 CDS 47,236,399 47,236,579
7 CDS 47,237,917 47,238,003
8 CDS 47,241,450 47,241,637
9 CDS 47,243,476 47,243,616
10 CDS 47,246,043 47,246,262
11 CDS 47,246,885 47,247,090
Other genome
Genome Chromosome Start End Links
hg38 chr17 49,132,460 49,169,989 Link
CDS sequence
ATGTTCGGAAGCATGTTCCTTCAAGCAGTGTTCAGCAGCCCCAAGCCAGAACTCCCAAGTCCTGCCCCGGGTGTCCAGAAGCTGAAGCTTCTGCCTGAGGAACGTCTCAGGAACCTCTTTTCCTACGATGGAATCTGGCTGTTCCCGAAAAATCAGTGCAAATGTGAAGCCAACAAAGAGCAGGGAGGTTACAACTTTCAGGATGCCTATGGCCAGAGCGACCTCCCAGCGGTGAAAGCGAGGAGACAGGCTGAATTTGAACACTTTCAGAGGAGAGAAGGGCTGCCCCGCCCACTGCCCCTGCTGGTCCAGCCCAACCTCCCCTTTGGGTACCCAGTCCACGGAGTGGAGGTGATGCCCCTGCACACGGTTCCCATCCCAGGCCTCCAGTTTGAAGGACCCGATGCCCCCGTCTATGAGGTCACCCTGACAGCTTCTCTGGGGACACTGAACACCCTTGCTGATGTCCCAGACAGTGTGGTGCAGGGCAGAGGCCAGAAGCAGCTGATCATTTCTACCAGTGACCGGAAGCTGTTGAAGTTCATTCTTCAGCACGTGACATACACCAGCACGGGGTACCAGCACCAGAAGGTAGACATAGTGAGTCTGGAGTCCAGGTCCTCAGTGGCCAAGTTTCCAGTGACCATCCGCCATCCTGTCATACCCAAGCTATACGACCCTGGACCAGAGAGGAAGCTCAGAAACCTGGTTACCATTGCTACCAAGACTTTCCTCCGCCCCCACAAGCTCATGATCATGCTCCGGAGTATTCGAGAGTATTACCCAGACTTGACCGTAATAGTGGCTGATGACAGCCAGAAGCCCCTGGAAATTAAAGACAATCACGTGGAGTATTACACTATGCCCTTTGGGAAGGGTTGGTTTGCTGGTAGGAACCTGGCCATATCTCAGGTCACCACCAAATACGTTCTCTGGGTGGACGATGATTTTCTCTTCAACGAGGAGACCAAGATTGAGGTGCTGGTGGATGTCCTGGAGAAAACAGAACTGGACGTGGTAGGCGGCAGTGTGCTGGGAAATGTGTTCCAGTTTAAGTTGTTGCTGGAACAGAGTGAGAATGGGGCCTGCCTTCACAAGAGGATGGGATTTTTCCAACCCCTGGATGGCTTCCCCAGCTGCGTGGTGACCAGTGGCGTGGTCAACTTCTTCCTGGCCCACACGGAGCGACTCCAAAGAGTTGGCTTTGATCCCCGCCTGCAACGAGTGGCTCACTCAGAATTCTTCATTGATGGGCTAGGGACCCTACTCGTGGGGTCATGCCCAGAAGTGATTATAGGTCACCAGTCTCGGTCTCCAGTGGTGGACTCAGAACTGGCTGCCCTAGAGAAGACCTACAATACATACCGGTCCAACACCCTCACCCGGGTCCAGTTCAAGCTGGCCCTCCACTACTTCAAGAACCATCTCCAATGTGCCGCATAA
Amino sequence
MFGSMFLQAVFSSPKPELPSPAPGVQKLKLLPEERLRNLFSYDGIWLFPKNQCKCEANKEQGGYNFQDAYGQSDLPAVKARRQAEFEHFQRREGLPRPLPLLVQPNLPFGYPVHGVEVMPLHTVPIPGLQFEGPDAPVYEVTLTASLGTLNTLADVPDSVVQGRGQKQLIISTSDRKLLKFILQHVTYTSTGYQHQKVDIVSLESRSSVAKFPVTIRHPVIPKLYDPGPERKLRNLVTIATKTFLRPHKLMIMLRSIREYYPDLTVIVADDSQKPLEIKDNHVEYYTMPFGKGWFAGRNLAISQVTTKYVLWVDDDFLFNEETKIEVLVDVLEKTELDVVGGSVLGNVFQFKLLLEQSENGACLHKRMGFFQPLDGFPSCVVTSGVVNFFLAHTERLQRVGFDPRLQRVAHSEFFIDGLGTLLVGSCPEVIIGHQSRSPVVDSELAALEKTYNTYRSNTLTRVQFKLALHYFKNHLQCAA*