ENST00000582104.5 SNX11

Information
Transcript ID
ENST00000582104.5
Genome
hg19
Position
chr17:46,185,150-46,199,249
Strand
+
CDS length
789
Amino acid length
263
Gene symbol
SNX11
Gene type
protein-coding
Gene description
sorting nexin 11
Gene Entrez Gene ID
29916
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 46,185,150 46,185,200
2 46,189,393 46,189,473
3 46,189,936 46,190,022
4 46,190,663 46,190,763
5 46,196,066 46,196,161
6 46,196,336 46,196,548
7 46,198,597 46,199,249
CDS
Exon number Type Start Stop
2 CDS 46,189,456 46,189,473
3 CDS 46,189,936 46,190,022
4 CDS 46,190,663 46,190,763
5 CDS 46,196,066 46,196,161
6 CDS 46,196,336 46,196,548
7 CDS 46,198,597 46,198,870
Other genome
Genome Chromosome Start End Links
hg38 chr17 48,107,788 48,121,887 Link
CDS sequence
ATGGTCTGCAGAGAACAGGAGGTGATTACAGTGCGTGTTCAGGACCCCCGAGTGCAGAATGAGGGCTCCTGGAACTCTTATGTGGATTATAAGATATTCCTCCATACCAACAGCAAAGCCTTTACTGCCAAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAGCAGCTACAGAGAAATGCTGGTTTGGTGCCTGTTCCTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACCTCAGATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGAGATAGAAGCCTGTGTCCAGGGCCGAAGTACCATGACTGTGTCTGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCCCAGGAAGAGAGGCAGAGCTCTTCTCACCTGGCTAAAGGAGACCAGCCTAAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGAGCTCTCCCTCACCGCCTCCCAGTGAAGAAAAGGACCATTTAGAAGTGTGGGCTCCAGTTGTTGACTCTGAGGTTCCTTCCTTGGAAAGTCCCACTCTCCCACCCCTCTCCTCACCATTATGCTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCACTCTTCAGTCTGTGAGGAGGGCTGTGGGAGGAGATCATGCTGTGCCTTTGGACCCTGGTCAGTTAGAAACAGTTTTGGAAAAGTGA
Amino sequence
MVCREQEVITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVPEIEACVQGRSTMTVSDAILRYAMSNCGWAQEERQSSSHLAKGDQPKSCCFLPRSGRRSSPSPPPSEEKDHLEVWAPVVDSEVPSLESPTLPPLSSPLCCDFGRPKEGTSTLQSVRRAVGGDHAVPLDPGQLETVLEK*