ENST00000590194.5 SLC25A39

Information
Transcript ID
ENST00000590194.5
Genome
hg19
Position
chr17:42,397,010-42,402,177
Strand
-
CDS length
1,056
Amino acid length
352
Gene symbol
SLC25A39
Gene type
protein-coding
Gene description
solute carrier family 25 member 39
Gene Entrez Gene ID
51629
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 42,397,010 42,397,484
11 42,397,564 42,397,644
10 42,397,723 42,397,804
9 42,397,990 42,398,099
8 42,398,426 42,398,599
7 42,398,802 42,398,926
6 42,399,068 42,399,135
5 42,399,787 42,399,896
4 42,400,176 42,400,220
3 42,400,652 42,400,711
2 42,400,846 42,400,958
1 42,402,079 42,402,177
CDS
Exon number Type Start Stop
12 CDS 42,397,369 42,397,484
11 CDS 42,397,564 42,397,644
10 CDS 42,397,723 42,397,804
9 CDS 42,397,990 42,398,099
8 CDS 42,398,426 42,398,599
7 CDS 42,398,802 42,398,926
6 CDS 42,399,068 42,399,135
5 CDS 42,399,787 42,399,896
4 CDS 42,400,176 42,400,220
3 CDS 42,400,652 42,400,711
2 CDS 42,400,846 42,400,930
Other genome
Genome Chromosome Start End Links
hg38 chr17 44,319,642 44,324,809 Link
CDS sequence
ATGGCTGACCAGGACCCTGCGGGCATCAGCCCCCTCCAGCAAATGGTGGCCTCAGGCACCGGGGCTGTGGTTACCTCTCTCTTCATGACACCCCTGGACGTGGTGAAGGTTCGCCTGCAGTCTCAGCGGCCCTCCATGGCCAGCGAGCTGATGCCTTCCTCCAGACTGTGGAGCCTCTCCTATACCAAATGGAAGTGCCTCCTGTATTGCAATGGTGTCCTGGAGCCTCTGTACCTGTGCCCAAATGGTGCCCGCTGTGCCACCTGGTTTCAAGACCCTACCCGCTTCACTGGCACCATGGATGCCTTCGTGAAGATCGTGAGGCACGAGGGCACCAGGACCCTCTGGAGCGGCCTCCCCGCCACCCTGGTGATGACTGTGCCAGCTACCGCCATCTACTTCACTGCCTATGACCAACTGAAGGCCTTCCTGTGTGGTCGAGCCCTGACCTCTGACCTCTACGCACCCATGGTGGCTGGCGCGCTGGCCCGCCTGGGCACCGTGACTGTGATCAGCCCCCTGGAGCTTATGCGGACAAAGCTGCAGGCTCAGCATGTGTCGTACCGGGAGCTGGGTGCCTGTGTTCGAACTGCAGTGGCTCAGGGTGGCTGGCGCTCACTGTGGCTGGGCTGGGGCCCCACTGCCCTTCGAGATGTGCCCTTCTCAGCCCTGTACTGGTTCAACTATGAGCTGGTGAAGAGCTGGCTCAATGGGTTCAGGCCGAAGGACCAGACTTCTGTGGGCATGAGCTTTGTGGCTGGTGGCATCTCAGGGACGGTGGCTGCAGTGCTGACTCTACCCTTTGACGTGGTAAAGACCCAACGCCAGGTCGCTCTGGGAGCGATGGAGGCTGTGAGAGTGAACCCCCTGCATGTGGACTCCACCTGGCTGCTGCTGCGGAGGATCCGGGCCGAGTCGGGCACCAAGGGACTCTTTGCAGGCTTCCTTCCTCGGATCATCAAGGCTGCCCCCTCCTGTGCCATCATGATCAGCACCTATGAGTTCGGCAAAAGCTTCTTCCAGAGGCTGAACCAGGACCGGCTTCTGGGCGGCTGA
Amino sequence
MADQDPAGISPLQQMVASGTGAVVTSLFMTPLDVVKVRLQSQRPSMASELMPSSRLWSLSYTKWKCLLYCNGVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFLCGRALTSDLYAPMVAGALARLGTVTVISPLELMRTKLQAQHVSYRELGACVRTAVAQGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSWLNGFRPKDQTSVGMSFVAGGISGTVAAVLTLPFDVVKTQRQVALGAMEAVRVNPLHVDSTWLLLRRIRAESGTKGLFAGFLPRIIKAAPSCAIMISTYEFGKSFFQRLNQDRLLGG*