ENST00000591247.6 LSM12

Information
Transcript ID
ENST00000591247.6
Genome
hg19
Position
chr17:42,111,696-42,144,987
Strand
-
CDS length
588
Amino acid length
196
Gene symbol
LSM12
Gene type
protein-coding
Gene description
LSM12 homolog
Gene Entrez Gene ID
124801
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 42,111,696 42,113,668
5 42,114,780 42,114,906
4 42,117,515 42,117,624
3 42,141,169 42,141,302
2 42,143,832 42,144,101
1 42,144,811 42,144,987
CDS
Exon number Type Start Stop
6 CDS 42,113,576 42,113,668
5 CDS 42,114,780 42,114,906
4 CDS 42,117,515 42,117,624
3 CDS 42,141,169 42,141,302
2 CDS 42,143,832 42,143,955
Other genome
Genome Chromosome Start End Links
hg38 chr17 44,034,328 44,067,619 Link
CDS sequence
ATGGCGGCTCCTCCGGGCGAGTACTTCAGCGTTGGGAGCCAGGTGTCGTGCCGGACGTGCCAGGAGCAGCGGCTGCAGGGCGAGGTGGTAGCCTTTGACTACCAATCCAAAATGCTGGCTTTAAAATGTCCCTCTTCCAGTGGAAAGCCCAACCATGCAGACATCTTGCTCATAAACTTACAGTATGTTTCAGAAGTGGAAATAATTAATGACCGAACAGAAACCCCTCCTCCCCTAGCTTCACTCAATGTTAGTAAGCTTGCCAGCAAAGCACGGACAGAGAAGGAGGAGAAGCTGAGCCAGGCCTATGCAATCAGTGCTGGTGTCTCTCTAGAGGGCCAGCAGCTCTTCCAGACCATTCACAAGACCATTAAAGACTGTAAATGGCAAGAAAAAAACATCGTAGTCATGGAAGAAGTTGTTATTACACCCCCATATCAAGTGGAAAACTGTAAAGGCAAAGAGGGGAGTGCACTGAGCCATGTACGCAAAATAGTTGAAAAACATTTTAGAGACGTGGAAAGCCAAAAGATACTGCAACGTTCACAAGCCCAGCAACCACAGAAGGAGGCTGCCCTGTCATCCTGA
Amino sequence
MAAPPGEYFSVGSQVSCRTCQEQRLQGEVVAFDYQSKMLALKCPSSSGKPNHADILLINLQYVSEVEIINDRTETPPPLASLNVSKLASKARTEKEEKLSQAYAISAGVSLEGQQLFQTIHKTIKDCKWQEKNIVVMEEVVITPPYQVENCKGKEGSALSHVRKIVEKHFRDVESQKILQRSQAQQPQKEAALSS*