ENST00000309428.10 RETREG3

Information
Transcript ID
ENST00000309428.10
Genome
hg19
Position
chr17:40,731,533-40,761,392
Strand
-
CDS length
1,401
Amino acid length
467
Gene symbol
RETREG3
Gene type
protein-coding
Gene description
reticulophagy regulator family member 3
Gene Entrez Gene ID
162427
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 40,731,533 40,734,288
8 40,734,692 40,734,824
7 40,735,516 40,735,598
6 40,737,143 40,737,280
5 40,738,071 40,738,155
4 40,738,783 40,738,909
3 40,739,852 40,739,882
2 40,744,074 40,744,180
1 40,761,104 40,761,392
CDS
Exon number Type Start Stop
9 CDS 40,733,831 40,734,288
8 CDS 40,734,692 40,734,824
7 CDS 40,735,516 40,735,598
6 CDS 40,737,143 40,737,280
5 CDS 40,738,071 40,738,155
4 CDS 40,738,783 40,738,909
3 CDS 40,739,852 40,739,882
2 CDS 40,744,074 40,744,180
1 CDS 40,761,104 40,761,342
Other genome
Genome Chromosome Start End Links
hg38 chr17 42,579,515 42,609,374 Link
CDS sequence
ATGGCTGAGGCCGAAGGGGTTCCCACGACCCCAGGCCCGGCTTCGGGGTCGACTTTCAGGGGCCGCCGAGATGTGTCAGGCTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGCGCAGCGGGCCCTGGTGGAGGTGCTGGGGCCTTACGAGCCTCTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTGGGAGCGGCCAGCTAGGAGCGCTCTGTGGTGCCTGGGGCTGAACGCGGCTTTCTGGTTTTTTGCCCTGACATCTCTTCGTCTTGTGTTTTTACTTGCATTTGGCTTGATGATCATTGTGTGTATTGATCAATGGAAGAACAAAATCTGGCCTGAAATAAAAGTGCCAAGACCCGACGCATTAGACAATGAGAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCATAAGGAATGTTTTGCTTTTCAAAAAGCAAAACCCAGGCAAGTTCTGCTTGCTGAGCTGTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGACAATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGACAACCACAGTGACAGCGAAGAGGAGCTTGCTGCCTTCTGTCCTCAGCTGGACGATTCTACTGTTGCCAGGGAATTGGCCATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACCTCTAACGGAAGGCTCTGAAGACCTAGATGGTCACAGTGATCCAGAGGAATCCTTTGCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGATGATGAGGACGACACTAGCATTGGCATGCCCAGCTTGATGTACCGTTCTCCGCCAGGGGCTGAGGAGCCCCAGGCCCCACCTGCCAGCCGGGACGAGGCTGCGCTGCCGGAGCTCCTGCTTGGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAGCCTGGTCTCCCAGGGTATGATTCAGCTGGCCTTGTCAGGGGCCTCCCAACCAGGCCCTTCTGGAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGATGCTGAGGGGGATGACTTTGAACTTCTGGACCAGTCGGAGCTGAGTCAGCTGGACCCTGCCAGTTCTAGGAGCCACTGA
Amino sequence
MAEAEGVPTTPGPASGSTFRGRRDVSGSWERDQQVEAAQRALVEVLGPYEPLLSRVQAALVWERPARSALWCLGLNAAFWFFALTSLRLVFLLAFGLMIIVCIDQWKNKIWPEIKVPRPDALDNESWGFVHPRLLSVPELCHHVAEVWVSGTIFIRNVLLFKKQNPGKFCLLSCGILTFLAVLGRYVPGLLLSYLMLVTVMMWPLAVYHRLWDRAYVRLKPALQRLDFSVRGYMMSKQRERQLRRRALHPERAMDNHSDSEEELAAFCPQLDDSTVARELAITDSEHSDAEVSCTDNGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQPGPSGAPAQRATRGFLRSPSSDLDTDAEGDDFELLDQSELSQLDPASSRSH*