ENST00000620260.6 RAPGEFL1

Information
Transcript ID
ENST00000620260.6
Genome
hg19
Position
chr17:38,333,723-38,351,902
Strand
+
CDS length
1,988
Amino acid length
662.667
Gene symbol
RAPGEFL1
Gene type
protein-coding
Gene description
Rap guanine nucleotide exchange factor like 1
Gene Entrez Gene ID
51195
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 38,333,723 38,334,359
2 38,334,360 38,334,633
3 38,337,868 38,337,946
4 38,340,466 38,340,601
5 38,340,833 38,340,930
6 38,345,118 38,345,230
7 38,345,460 38,345,627
8 38,346,686 38,346,783
9 38,346,892 38,347,014
10 38,347,568 38,347,746
11 38,347,834 38,347,924
12 38,348,465 38,348,515
13 38,348,858 38,348,945
14 38,349,178 38,349,242
15 38,349,615 38,349,669
16 38,349,916 38,351,902
CDS
Exon number Type Start Stop
1 CDS 38,334,115 38,334,359
2 CDS 38,334,360 38,334,633
3 CDS 38,337,868 38,337,946
4 CDS 38,340,466 38,340,601
5 CDS 38,340,833 38,340,930
6 CDS 38,345,118 38,345,230
7 CDS 38,345,460 38,345,627
8 CDS 38,346,686 38,346,783
9 CDS 38,346,892 38,347,014
10 CDS 38,347,568 38,347,746
11 CDS 38,347,834 38,347,924
12 CDS 38,348,465 38,348,515
13 CDS 38,348,858 38,348,945
14 CDS 38,349,178 38,349,242
15 CDS 38,349,615 38,349,669
16 CDS 38,349,916 38,350,040
Other genome
Genome Chromosome Start End Links
hg38 chr17 40,177,470 40,195,650 Link
CDS sequence
ATGAAGCCGCTGGAGAAATTTCTGAAGAAGCAGACGTCGCAGCTGGCGGGCCGAACGGTGGCGGGAGGTCCCGGCGGGGGTCTGGGGAGCTGCGGTGGGCCTGGAGGGGGTGGGGGACCCGGCGGGGGCGGCGGTCCAGCCGGGGGACAGCGGTCGTTGCAGCGGCGTCAGAGCGTGTCTCGCCTGCTGCTCCCCGCTTTCCTCCGGGAGCCCCCCGCCGAGCCGGGGCTGGAGCCGCCCCCTGAGAGGAAGGAGGAGAGCCGGCGGGGGTCGCGGAGGAGCCGGGCAGCGGGGGGCCCTGCTGGCTGCAGCTGGAGGAGGTGCCGGGGCCCGGGCCTCTCGGGGGAGGGGGGCCCCTGCGCTCCCCTTCCTCCTACTCATCTGACGAGCTGTCCCCAGGCGAGCCCTTGACTTCGCCGCCCTGGGCCCCTCTGGGCGCCCCCGAGCGGCCCGAGCATCTTCTGAACCGGGTTCTGGAGCGGCTTGCTGGAGGGGCTACCAGGGACAGCGCCGCCTCAGATATCCTGCTGGATGACATTGTCCTTACCCATTCTCTCTTCCTCCCGACGGAGAAATTTCTGCAGGAGCTACACCAGTACTTTGTTCGGGCAGGAGGCATGGAGGGCCCTGAAGGGCTGGGCCGGAAGCAAGCCTGTCTAGCCATGCTTCTCCATTTCTTGGACACCTACCAGGGGCTGCTTCAAGAGGAAGAGGGGGCCGGCCACATCATCAAGGATCTATACCTGCTAATTATGAAGGACGAGTCCCTTTACCAGGGCCTCCGAGAGGACACTCTGAGGCTGCACCAGCTGGTGGAGACGGTGGAACTAAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCTGTCTGCAGACCCGGGTGGCCTTCCGGGGCTCTGATGAGATCTTCTGCCGTGTATACATGCCTGACCACTCTTATGTGACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGACATTCTGGGCTCTGTGACGGAGAAACTTCAATATTCAGAGGAGCCCGCGGGGCGTGAGGATTCCCTCATCCTGGTAGCTGTGTCCTCCTCTGGAGAGAAGGTCCTTCTCCAGCCCACTGAGGACTGTGTTTTCACCGCACTGGGCATCAACAGCCACCTGTTTGCCTGTACTCGGGACAGCTATGAGGCTCTGGTGCCCCTCCCCGAGGAGATCCAGGTCTCCCCTGGAGACACAGAGATCCACCGAGTGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCACTGGGAGCTGTTCCGATGTGTGCATGAGCTGGAGTTCGTGGACTACGTGTTCCACGGGGAGCGCGGCCGCCGGGAGACGGCCAACTTGGAGCTGCTGCTGCAGCGCTGCAGCGAGGTCACGCACTGGGTGGCCACCGAAGTGCTGCTCTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTGCAAGCAGAACCAGGACCTGCTGTCTTTCTACGCCGTGGTCATGGGGCTGGACAACGCCGCTGTCAGCCGCCTTCGACTCACCTGGGAGAAGCTGCCAGGGAAATTCAAGAACTTGTTTCGCAAATTTGAGAACCTGACGGACCCCTGCAGGAACCACAAAAGCTACCGAGAAGTGATCTCCAAAATGAAGCCCCCTGTGATTCCCTTCGTGCCTCTGATCCTCAAAGACCTGACTTTCCTGCACGAAGGGAGTAAGACCCTTGTAGATGGTTTGGTGAACATCGAGAAGCTGCATTCAGTGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCCCCTTTGCCTGGACATGGAGGCATCCCCCAATCACCTGCAGACCAAGGCCTATGTGCGCCAGTTTCAGGTCATCGACAACCAGAACCTCCTCTTCGAGCTCTCCTACAAGCTGGAGGCAAACAGTCAGTGA
Amino sequence
MKPLEKFLKKQTSQLAGRTVAGGPGGGLGSCGGPGGGGGPGGGGGPAGGQRSLQRRQSVSRLLLPAFLREPPAEPGLEPPPERKEESRRGSRRSRAAGGPAGCSWRRCRGPGLSGEGGPCAPLPPTHLTSCPQASP*LRRPGPLWAPPSGPSIF*TGFWSGLLEGLPGTAPPQISCWMTLSLPILSSSRRRNFCRSYTSTLFGQEAWRALKGWAGSKPV*PCFSISWTPTRGCFKRKRGPATSSRIYTC*L*RTSPFTRASERTL*GCTSWWRRWN*RFQRRTSHPASR*SHSSATSAG*TPVCRPGWPSGALMRSSAVYTCLTTLM*PYAAAFQHLCRTFWAL*RRNFNIQRSPRGVRIPSSW*LCPPLERRSFSSPLRTVFSPHWASTATCLPVLGTAMRLWCPSPRRSRSPLETQRSTEWSLRTLPTT*LPSTGSCSDVCMSWSSWTTCSTGSAAAGRRPTWSCCCSAAARSRTGWPPKCCSARPRASARSCSRSSSRSRPSASRTRTCCLSTPWSWGWTTPLSAAFDSPGRSCQGNSRTCFANLRT*RTPAGTTKATEK*SPK*SPL*FPSCL*SSKT*LSCTKGVRPL*MVW*TSRSCIQWPKK*GQSANTGAGPFAWTWRHPPITCRPRPMCASFRSSTTRTSSSSSPTSWRQTVS