ENST00000456989.6 RAPGEFL1

Information
Transcript ID
ENST00000456989.6
Genome
hg19
Position
chr17:38,333,263-38,350,040
Strand
+
CDS length
1,536
Amino acid length
512
Gene symbol
RAPGEFL1
Gene type
protein-coding
Gene description
Rap guanine nucleotide exchange factor like 1
Gene Entrez Gene ID
51195
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 38,333,263 38,333,375
2 38,337,868 38,337,946
3 38,340,466 38,340,601
4 38,340,833 38,340,930
5 38,345,118 38,345,230
6 38,345,460 38,345,627
7 38,346,686 38,346,783
8 38,346,892 38,347,014
9 38,347,568 38,347,746
10 38,347,834 38,347,924
11 38,348,465 38,348,515
12 38,348,858 38,348,945
13 38,349,178 38,349,242
14 38,349,615 38,349,669
15 38,349,916 38,350,040
CDS
Exon number Type Start Stop
1 CDS 38,333,309 38,333,375
2 CDS 38,337,868 38,337,946
3 CDS 38,340,466 38,340,601
4 CDS 38,340,833 38,340,930
5 CDS 38,345,118 38,345,230
6 CDS 38,345,460 38,345,627
7 CDS 38,346,686 38,346,783
8 CDS 38,346,892 38,347,014
9 CDS 38,347,568 38,347,746
10 CDS 38,347,834 38,347,924
11 CDS 38,348,465 38,348,515
12 CDS 38,348,858 38,348,945
13 CDS 38,349,178 38,349,242
14 CDS 38,349,615 38,349,669
15 CDS 38,349,916 38,350,040
Other genome
Genome Chromosome Start End Links
hg38 chr17 40,177,010 40,193,788 Link
CDS sequence
ATGCTAATTCACCCAAGAGGCCTTCCCAGCTCTTCTCACAGAAGGAAGATAAACTCCACATATTTCTATATCCTGCTGGATGACATTGTCCTTACCCATTCTCTCTTCCTCCCGACGGAGAAATTTCTGCAGGAGCTACACCAGTACTTTGTTCGGGCAGGAGGCATGGAGGGCCCTGAAGGGCTGGGCCGGAAGCAAGCCTGTCTAGCCATGCTTCTCCATTTCTTGGACACCTACCAGGGGCTGCTTCAAGAGGAAGAGGGGGCCGGCCACATCATCAAGGATCTATACCTGCTAATTATGAAGGACGAGTCCCTTTACCAGGGCCTCCGAGAGGACACTCTGAGGCTGCACCAGCTGGTGGAGACGGTGGAACTAAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCTGTCTGCAGACCCGGGTGGCCTTCCGGGGCTCTGATGAGATCTTCTGCCGTGTATACATGCCTGACCACTCTTATGTGACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGACATTCTGGGCTCTGTGACGGAGAAACTTCAATATTCAGAGGAGCCCGCGGGGCGTGAGGATTCCCTCATCCTGGTAGCTGTGTCCTCCTCTGGAGAGAAGGTCCTTCTCCAGCCCACTGAGGACTGTGTTTTCACCGCACTGGGCATCAACAGCCACCTGTTTGCCTGTACTCGGGACAGCTATGAGGCTCTGGTGCCCCTCCCCGAGGAGATCCAGGTCTCCCCTGGAGACACAGAGATCCACCGAGTGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCACTGGGAGCTGTTCCGATGTGTGCATGAGCTGGAGTTCGTGGACTACGTGTTCCACGGGGAGCGCGGCCGCCGGGAGACGGCCAACTTGGAGCTGCTGCTGCAGCGCTGCAGCGAGGTCACGCACTGGGTGGCCACCGAAGTGCTGCTCTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTGCAAGCAGAACCAGGACCTGCTGTCTTTCTACGCCGTGGTCATGGGGCTGGACAACGCCGCTGTCAGCCGCCTTCGACTCACCTGGGAGAAGCTGCCAGGGAAATTCAAGAACTTGTTTCGCAAATTTGAGAACCTGACGGACCCCTGCAGGAACCACAAAAGCTACCGAGAAGTGATCTCCAAAATGAAGCCCCCTGTGATTCCCTTCGTGCCTCTGATCCTCAAAGACCTGACTTTCCTGCACGAAGGGAGTAAGACCCTTGTAGATGGTTTGGTGAACATCGAGAAGCTGCATTCAGTGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCCCCTTTGCCTGGACATGGAGGCATCCCCCAATCACCTGCAGACCAAGGCCTATGTGCGCCAGTTTCAGGTCATCGACAACCAGAACCTCCTCTTCGAGCTCTCCTACAAGCTGGAGGCAAACAGTCAGTGA
Amino sequence
MLIHPRGLPSSSHRRKINSTYFYILLDDIVLTHSLFLPTEKFLQELHQYFVRAGGMEGPEGLGRKQACLAMLLHFLDTYQGLLQEEEGAGHIIKDLYLLIMKDESLYQGLREDTLRLHQLVETVELKIPEENQPPSKQVKPLFRHFRRIDSCLQTRVAFRGSDEIFCRVYMPDHSYVTIRSRLSASVQDILGSVTEKLQYSEEPAGREDSLILVAVSSSGEKVLLQPTEDCVFTALGINSHLFACTRDSYEALVPLPEEIQVSPGDTEIHRVEPEDVANHLTAFHWELFRCVHELEFVDYVFHGERGRRETANLELLLQRCSEVTHWVATEVLLCEAPGKRAQLLKKFIKIAALCKQNQDLLSFYAVVMGLDNAAVSRLRLTWEKLPGKFKNLFRKFENLTDPCRNHKSYREVISKMKPPVIPFVPLILKDLTFLHEGSKTLVDGLVNIEKLHSVAEKVRTIRKYRSRPLCLDMEASPNHLQTKAYVRQFQVIDNQNLLFELSYKLEANSQ*