ENST00000578648.5 MSL1

Information
Transcript ID
ENST00000578648.5
Genome
hg19
Position
chr17:38,278,837-38,291,063
Strand
+
CDS length
1,797
Amino acid length
599
Gene symbol
MSL1
Gene type
protein-coding
Gene description
MSL complex subunit 1
Gene Entrez Gene ID
339287
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 38,278,837 38,279,633
2 38,282,436 38,282,659
3 38,285,498 38,285,880
4 38,288,287 38,288,351
5 38,289,295 38,289,362
6 38,289,787 38,289,911
7 38,290,080 38,290,152
8 38,290,532 38,291,063
CDS
Exon number Type Start Stop
1 CDS 38,278,866 38,279,633
2 CDS 38,282,436 38,282,659
3 CDS 38,285,498 38,285,880
4 CDS 38,288,287 38,288,351
5 CDS 38,289,295 38,289,362
6 CDS 38,289,787 38,289,911
7 CDS 38,290,080 38,290,152
8 CDS 38,290,532 38,290,622
Other genome
Genome Chromosome Start End Links
hg38 chr17 40,122,584 40,134,810 Link
CDS sequence
ATGACCATGAGATCCGCGGTGTTCAAGGCGGCCGCGGCCCCTGCCGGCGGCAATCCTGAGCAGCGACTGGACTACGAGCGGGCTGCGGCGCTGGGCGGGCCCGAGGACGAGCCTGGGGCGGCCGAAGCCCACTTCCTCCCCCGGCACCGTAAGCTCAAGGAGCCGGGGCCCCCGCTGGCCTCCTCCCAGGGCGGGAGCCCCGCGCCTTCCCCGGCCGGCTGCGGCGGCAAGGGCCGGGGCTTGTTACTCCCGGCCGGGGCGGCCCCCGGGCAGCAGGAAGAGAGCTGGGGCGGTTCGGTGCCCTTGCCCTGTCCGCCCCCGGCCACCAAGCAAGCCGGCATTGGGGGGGAGCCTGCCGCAGCCGGAGCCGGCTGCAGCCCCCGGCCCAAGTATCAGGCGGTGCTGCCCATTCAGACGGGCTCTCTCGTGGCGGCGGCCAAAGAGCCTACGCCCTGGGCTGGGGACAAGGGTGGGGCGGCCTCCCCCGCTGCCACCGCCTCGGACCCGGCGGGACCCCCACCACTACCTCTGCCCGGGCCGCCACCCCTCGCGCCCACCGCCACCGCCGGGACCCTGGCGGCCAGCGAGGGCAGATGGAAGAGTATGAGGAAGAGCCCTCTCGGGGGTGGTGGCGGCTCGGGAGCCTCCAGTCAGGCCGCCTGCCTCAAACAGATCCTTCTGCTGCAATTGGACCTCATCGAACAGCAGCAGCAGCAGCTGCAGGCCAAGGAAAAGGAGATCGAGGAGCTGAAGTCAGAGAGAGACACGCTCCTTGCTCGGATTGAACGTATGGAAAGGCGGATGCAGCTGGTAAAGAAGGATAACGAGAAAGAAAGGCACAAGCTGTTTCAGGGCTATGAAACTGAAGAGAGAGAGGAAACAGAGCTATCTGAGAAAATTAAACTGGAGTGCCAGCCGGAGCTTTCCGAGACATCCCAGACTCTGCCTCCCAAGCCCTTCTCATGTGGGCGGAGTGGAAAGGGACATAAAAGGAAATCCCCATTTGGAAGTACAGAAAGAAAGACTCCTGTTAAAAAGCTGGCTCCTGAATTTTCAAAAGTCAAAACAAAAACTCCTAAGCACTCTCCTATTAAAGAGGAACCCTGTGGTTCCTTATCTGAAACTGTTTGTAAACGTGAATTGAGGAGCCAAGAAACCCCAGAAAAGCCCCGGTCTTCAGTGGACACCCCACCAAGACTCTCCACTCCCCAAAAGGGACCCAGCACCCATCCCAAGGAGAAAGCCTTCTCAAGTGAGATAGAAGATTTGCCGTACCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACCGTTACCATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTGTAGCAATTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCTAAGGGACCCAAATCCTTCAGACCTTTTGGAGAACCTGGATGACAGTGTGTTTTCGAAGCGGCATGCAAAACTGGAGCTGGATGAGAAGAGAAGGAAAAGATGGGATATTCAGAGGATCAGGGAACAAAGAATTTTACAGCGACTGCAGCTCAGAATGTATAAAAAGAAAGGAATTCAGGAATCTGAGCCTGAGGTTACCTCATTTTTCCCTGAGCCAGATGATGTTGAAAGTTTGATGATTACCCCCTTCTTGCCTGTTGTAGCATTTGGACGACCATTACCAAAATTAACTCCACAGAATTTTGAGCTACCCTGGTTGGATGAGCGTAGCCGATGCAGATTGGAGATCCAGAAGAAGCAAACACCTCACCGGACGTGTAGGAAATAG
Amino sequence
MTMRSAVFKAAAAPAGGNPEQRLDYERAAALGGPEDEPGAAEAHFLPRHRKLKEPGPPLASSQGGSPAPSPAGCGGKGRGLLLPAGAAPGQQEESWGGSVPLPCPPPATKQAGIGGEPAAAGAGCSPRPKYQAVLPIQTGSLVAAAKEPTPWAGDKGGAASPAATASDPAGPPPLPLPGPPPLAPTATAGTLAASEGRWKSMRKSPLGGGGGSGASSQAACLKQILLLQLDLIEQQQQQLQAKEKEIEELKSERDTLLARIERMERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVAIPSWRDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVESLMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK*