ENST00000617633.5 DDX52

Information
Transcript ID
ENST00000617633.5
Genome
hg19
Position
chr17:35,969,787-36,003,475
Strand
-
CDS length
1,800
Amino acid length
600
Gene symbol
DDX52
Gene type
protein-coding
Gene description
DExD-box helicase 52
Gene Entrez Gene ID
11056
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
16 35,969,787 35,970,339
15 35,970,340 35,974,398
14 35,978,337 35,978,429
13 35,979,813 35,979,884
12 35,980,918 35,980,993
11 35,981,172 35,981,322
10 35,981,443 35,981,565
9 35,984,390 35,984,480
8 35,985,941 35,986,144
7 35,986,834 35,986,906
6 35,988,605 35,988,716
5 35,990,060 35,990,203
4 35,992,143 35,992,328
3 35,993,318 35,993,448
2 36,002,139 36,002,337
1 36,003,363 36,003,475
CDS
Exon number Type Start Stop
15 CDS 35,974,341 35,974,398
14 CDS 35,978,337 35,978,429
13 CDS 35,979,813 35,979,884
12 CDS 35,980,918 35,980,993
11 CDS 35,981,172 35,981,322
10 CDS 35,981,443 35,981,565
9 CDS 35,984,390 35,984,480
8 CDS 35,985,941 35,986,144
7 CDS 35,986,834 35,986,906
6 CDS 35,988,605 35,988,716
5 CDS 35,990,060 35,990,203
4 CDS 35,992,143 35,992,328
3 CDS 35,993,318 35,993,448
2 CDS 36,002,139 36,002,337
1 CDS 36,003,363 36,003,449
Other genome
Genome Chromosome Start End Links
hg38 chr17 37,609,739 37,643,446 Link
CDS sequence
ATGGACGTCCACGATCTCTTTCGCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAAATATGACTTTGATTCTTCGGAGGTGCTTCAGGGACTGGACTTTTTTGGAAACAAGAAGTCTGTCCCAGGTGTGTGTGGAGCATCACAAACACATCAGAAGCCCCAAAATGGAGAGAAAAAAGAAGAGAGCCTAACTGAAAGGAAGAGGGAGCAGAGCAAGAAAAAAAGGAAGACGATGACTTCAGAAATTGCTTCCCAAGAAGAAGGTGCTACTATACAGTGGATGTCATCTGTAGAAGCAAAGATTGAAGACAAAAAAGTTCAGAGAGAAAGTAAACTAACTTCCGGAAAGTTGGAGAATCTCAGAAAAGAAAAGATAAACTTCTTGCGGAATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTCGACTACTTCAGAACATTCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAACATTAGCTTTTAGCATTCCTATTTTAATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAAAATTTCTGAGGGAACAGGATTCAGGATACACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAAATCATCTAAAAAGTTTGATATTCTTGTGACTACTCCAAATCGACTAATCTATTTATTAAAGCAAGATCCCCCCGGAATCGACCTAGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGCATATGATGTTGAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACCGGAAAACTTCTGGCCATGAGAGAACTTGTTAAAAAGGGTTTCAATCCACCTGTTCTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATATATGAAGGTATTAATGTGGATGTTATTCATGCAGAGAGAACACAACAACAGAGAGATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGATTTTAAAGGTGTGAACTTGGTGATCAACTATGACTTTCCAACTAGCTCAGTGGAATATATCCACAGGATAGGTCGAACTGGAAGAGCAGGGAATAAGGGAAAAGCAATTACATTTTTCACTGAGGATGATAAGCCATTATTAAGAAGCGTTGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTACTAAGCAAACAAAAGAAAAAGATGATTAAGAAACCATTGGAAAGGGAGAGCATTAGTACAACTCCAAAATGTTTCTTAGAAAAAGCTAAGGATAAACAGAAAAAGGTCACTGGTCAGAACAGCAAGAAGAAAGTAGCTCTTGAAGACAAAAGTTAA
Amino sequence
MDVHDLFRRLGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTHQKPQNGEKKEESLTERKREQSKKKRKTMTSEIASQEEGATIQWMSSVEAKIEDKKVQRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESISTTPKCFLEKAKDKQKKVTGQNSKKKVALEDKS*