ENST00000612980.4 RDM1
Information
- Transcript ID
- ENST00000612980.4
- Genome
- hg19
- Position
- chr17:34,245,346-34,257,731
- Strand
- -
- CDS length
- 501
- Amino acid length
- 167
- Gene symbol
- RDM1
- Gene type
- protein-coding
- Gene description
- RAD52 motif containing 1
- Gene Entrez Gene ID
- 201299
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 34,245,346 | 34,245,447 |
| 3 | 34,252,519 | 34,252,641 |
| 2 | 34,257,080 | 34,257,259 |
| 1 | 34,257,636 | 34,257,731 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 34,245,346 | 34,245,447 |
| 3 | CDS | 34,252,519 | 34,252,641 |
| 2 | CDS | 34,257,080 | 34,257,259 |
| 1 | CDS | 34,257,636 | 34,257,731 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 35,918,342 | 35,930,727 | Link |
CDS sequence
ATGGCGGAGTTGGTACCTTTTGCGGTTCCCATCGAGAGTGACAAAACCTTGCTAGTGTGGGAGCTGAGCTCCGGACCCACGGCCGAGGCTTTGCATCATTCTCTGTTCACAGCATTTTCTCAGTTTGGCCTTCTGTATTCAGTCCGGGTCTTCCCAAATGCTGCAGTGGCCCATCCTGGTTTCTATGCCGTCATTAAGTTTTATTCTGCAAGGGCTGCCCACAGAGCCCAAAAGGCATGCGACCGGAAGCAGCTTTTTCAGAAATCTCCAGTCAAGGTTCGTCTTGGCACCAGACATAAGGCAGTTCAACATCAAGCCCTTGCCCTGAACAGTTCCAAATGCCAAGAACTGGCGAATTACTACTTTGGTTTCAATGGGTGTTCCAAAAGGATCATCAAGGTCCCTTGCTCTCCCTGGAAGCAGTATGGCCAAGAGGAGGAAGGGTATCTCTCGGATTTCAGCTTGGAGGAGGAAGAGTTCAGGCTGCCAGAACTTGACTAG
Amino sequence
MAELVPFAVPIESDKTLLVWELSSGPTAEALHHSLFTAFSQFGLLYSVRVFPNAAVAHPGFYAVIKFYSARAAHRAQKACDRKQLFQKSPVKVRLGTRHKAVQHQALALNSSKCQELANYYFGFNGCSKRIIKVPCSPWKQYGQEEEGYLSDFSLEEEEFRLPELD*