ENST00000615136.4 MMP28

Information
Transcript ID
ENST00000615136.4
Genome
hg19
Position
chr17:34,093,359-34,122,628
Strand
-
CDS length
1,181
Amino acid length
393.667
Gene symbol
MMP28
Gene type
protein-coding
Gene description
matrix metallopeptidase 28
Gene Entrez Gene ID
79148
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
10 34,093,359 34,093,913
9 34,093,992 34,094,054
8 34,094,771 34,094,938
7 34,095,249 34,095,398
6 34,097,086 34,097,331
5 34,100,185 34,100,350
4 34,100,351 34,100,408
3 34,105,892 34,106,079
2 34,106,248 34,106,327
1 34,122,271 34,122,628
CDS
Exon number Type Start Stop
9 CDS 34,094,041 34,094,054
8 CDS 34,094,771 34,094,938
7 CDS 34,095,249 34,095,398
6 CDS 34,097,086 34,097,331
5 CDS 34,100,185 34,100,350
4 CDS 34,100,351 34,100,408
3 CDS 34,105,892 34,106,079
2 CDS 34,106,248 34,106,327
1 CDS 34,122,271 34,122,381
Other genome
Genome Chromosome Start End Links
hg38 chr17 35,766,340 35,795,624 Link
CDS sequence
ATGGTCGCGCGCGTCGGCCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAAGGAGGCGGAGGCATTCCTAGAGAAGTACGGATACCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCACTCGATTCAGCGATGCCATCAGAGCGTTTCAGTGGGTGTCCCAGCTACCTGTCAGCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCGCTGCGGGGTTACAGATACCAACAGTTATGCGGCCTGGGCTGAGAGGATCAGTGACTTGTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTACAAGCAGCACCTCTCCTACCGCCTGGTGAACTGGCCTGAGCATCTCCGGAGCCGGCAGTTCGGGGCGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGGGAGGCCCCAGCCACAGGCCCCGCTGACATCCGGCTCACCTTCTTCCAAGGGGACCACAACGATGGGCTGGGCAATGCCTTTGATGGCCCAGGGGGCGCCCTGGCGCACGCCTTCCTGCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTCCCTGAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGCTGGCGCACGAGATCGGTCACACGCTTGGCCTCACCCACTCGCCCGCGCCGCGCGCGCTCATGGCGCCCTACTACAAGAGGCTGGGCCGCGACGCGCTGCTCAGCTGGGACGACGTGCTGGCCGTGCAGAGCCTGTATGGGAAGCCCCTAGGGGGCTCAGTGGCCGTCCAGCTCCCAGGAAAGCTGTTCACTGACTTTGAGACCTGGGACTCCTACAGCCCCCAAGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGCCATCACTGTAGACAGGCAACAGCAACTGTACATTTTTAAAGGGAGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGGGCTGCCCCCCAACATTGAGGCTGCGGCAGTGTCATTGAATGATGGAGATTTCTACTTCTTCAAAGTGCAATCCGTTTGA
Amino sequence
MVARVGLLLRALQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAPTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRKKRFAKQGNKWYKQHLSYRLVNWPEHLRSRQFGAPCAPPSSCGATSQRWSSGRPQPQAPLTSGSPSSKGTTTMGWAMPLMAQGAPWRTPSCPAAAKRTSTKMSAGP*AAAAGATCSWCWRTRSVTRLASPTRPRRARSWRPTTRGWAATRCSAGTTCWPCRACMGSP*GAQWPSSSQESCSLTLRPGTPTAPKEGALKRRALNTATLPSMPSL*TGNSNCTFLKGAISGRWQLMATSQSPVHCRKDGSGCPPTLRLRQCH*MMEISTSSKCNPF