ENST00000542635.5 SLFN13

Information
Transcript ID
ENST00000542635.5
Genome
hg19
Position
chr17:33,764,564-33,774,413
Strand
-
CDS length
2,694
Amino acid length
898
Gene symbol
SLFN13
Gene type
protein-coding
Gene description
schlafen family member 13
Gene Entrez Gene ID
146857
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 33,764,564 33,768,385
5 33,768,582 33,769,305
4 33,770,808 33,770,939
3 33,771,634 33,772,712
2 33,773,736 33,773,772
1 33,774,287 33,774,413
CDS
Exon number Type Start Stop
6 CDS 33,767,614 33,768,385
5 CDS 33,768,582 33,769,305
4 CDS 33,770,808 33,770,939
3 CDS 33,771,634 33,772,699
Other genome
Genome Chromosome Start End Links
hg38 chr17 35,437,545 35,447,394 Link
CDS sequence
ATGGAGGCAAATCACTGCTCCCTGGGTGTGTATCCATCTTACCCAGACCTGGTCATCGATGTCGGAGAAGTGACTCTGGGAGAAGAAAACAGAAAAAAGCTACAGAAAACTCAGAGAGACCAAGAGAGGGCGAGAGTTATACGGGCCGCGTGTGCTTTATTAAACTCAGGAGGAGGAGTGATTCAGATGGAAATGGCCAACAGGGATGAGCGTCCCACAGAGATGGGACTGGATTTAGAAGAATCCTTGAGAAAGCTTATTCAGTATCCATATTTGCAGGCTTTCTTTGAGACTAAGCAACACGGAAGGTGTTTTTATATTTTTGTTAAATCTTGGAGTGGTGATCCTTTCCTTAAAGATGGTTCTTTCAATTCCCGCATTTGCAGCCTTAGTTCTTCATTATACTGTAGATCTGGCACCTCTGTGCTTCACATGAATTCAAGACAGGCATTCGATTTCCTGAAGACCAAGGAAAGACAGTCCAAATATAATCTGATTAATGAAGGGTCTCCACCTAGTAAAATTATGAAAGCTGTATACCAGAACATATCTGAGTCAAATCCTGCATATGAAGTTTTCCAAACTGACACTATTGAATATGGTGAAATCCTATCTTTTCCTGAGTCTCCATCCATAGAGTTTAAACAGTTCTCTACAAAACATATCCAACAATATGTAGAAAATATAATTCCAGAGTACATCTCTGCATTTGCAAACACTGAGGGAGGCTATCTTTTTATTGGAGTGGATGATAAGAGTAGGAAAGTCCTGGGATGTGCCAAAGAACAGGTTGACCCTGACTCTTTGAAAAATGTAATTGCAAGAGCAATTTCTAAGTTGCCCATTGTTCATTTTTGCTCTTCAAAACCTCGGGTAGAGTACAGCACCAAAATCGTAGAAGTGTTTTGTGGGAAAGAGTTGTATGGCTATCTCTGTGTGATTAAAGTGAAGGCATTCTGTTGTGTGGTGTTCTCGGAAGCTCCCAAGTCATGGATGGTGAGGGAGAAGTACATCCGCCCCTTGACAACTGAGGAATGGGTAGAGAAAATGATGGACGCAGATCCAGAGTTTCCTCCAGACTTTGCTGAGGCCTTTGAGTCTCAGTTGAGTCTATCTGACAGTCCTTCACTTTGCAGACCAGTGTATTCTAAGAAAGGTCTGGAACACAAAGCTGATCTACAACAACATTTATTTCCAGTTCCACCAGGACATTTGGAATGTACTCCAGAGTCCCTCTGGAAGGAGCTGTCTTTACAGCATGAAGGACTAAAGGAGTTAATACACAAGCAAATGCGACCTTTCTCCCAGGGAATTGTGATCCTCTCTAGAAGCTGGGCTGTGGACCTGAACTTGCAGGAGAAGCCAGGAGTCATCTGTGATGCTCTGCTGATAGCACAGAACAGCACCCCCATTCTCTACACCATTCTCAGGGAGCAGGATGCAGAGGGCCAGGACTACTGCACTCGCACCGCCTTTACTTTGAAGCAGAAGCTAGTGAACATGGGGGGCTACACCGGGAAGGTGTGTGTCAGGGCCAAGGTCCTCTGCCTGAGTCCTGAGAGCAGCGCAGAGGCCTTGGAGGCTGCAGTGTCTCCGATGGATTACCCTGCGTCCTATAGCCTTGCAGGCACCCAGCACATGGAAGCCCTGCTGCAGTCCCTCGTGATTGTCTTACTCGGCTTCAGGTCTCTCTTGAGTGACCAGCTCGGCTGTGAGGTTTTAAATCTGCTCACAGCCCAGCAGTATGAGATATTCTCCAGAAGCCTCCGCAAGAACAGAGAGTTGTTTGTCCACGGCTTACCTGGCTCAGGGAAGACCATCATGGCCATGAAGATCATGGAGAAGATCAGGAATGTGTTTCACTGTGAGGCACACAGAATTCTCTACGTTTGTGAAAACCAGCCTCTGAGGAACTTTATCAGTGATAGAAATATCTGCCGAGCAGAGACCCGGGAAACTTTCCTAAGAGAAAAATTTGAACACATTCAACACATCGTCATTGACGAAGCTCAGAATTTCCGTACTGAAGATGGGGACTGGTATAGGAAGGCAAAAACCATCACTCAGAGAGAAAAGGATTGTCCAGGAGTTCTCTGGATCTTTCTGGACTACTTTCAGACCAGTCACTTGGGTCACAGTGGCCTTCCCCCTCTCTCAGCACAGTATCCAAGAGAAGAGCTCACCAGAGTAGTTCGCAATGCAGATGAAATAGCCGAGTACATACAACAAGAAATGCAACTAATTATAGAAAATCCTCCAATTAATATCCCCCATGGGTATCTGGCAATTCTCAGTGAAGCTAAATGGGTTCCAGGTGTTCCAGGCAACACAAAGATTATTAAAAACTTTACTTTGGAGCAAATAGTGACCTATGTGGCAGACACCTGCAGGTGCTTCTTTGAAAGGGGCTATTCTCCAAAGGATGTTGCTGTGCTTGTCAGCACCGTGACAGAAGTGGAGCAGTATCAGTCTAAGCTCTTGAAAGCAATGAGGAAGAAAATGGTGGTGCAGCTCAGTGATGCATGTGATATGTTGGGTGTGCACATTGTGTTGGACAGTGTCCGGCGATTCTCAGGCCTGGAAAGGAGCATAGTGTTTGGGATCCATCCAAGGACAGCTGACCCAGCTATCTTACCCAATATTCTGATCTGTCTGGCTTCCAGGGCAAAACAGCACCTATATATTTTTCTGTGA
Amino sequence
MEANHCSLGVYPSYPDLVIDVGEVTLGEENRKKLQKTQRDQERARVIRAACALLNSGGGVIQMEMANRDERPTEMGLDLEESLRKLIQYPYLQAFFETKQHGRCFYIFVKSWSGDPFLKDGSFNSRICSLSSSLYCRSGTSVLHMNSRQAFDFLKTKERQSKYNLINEGSPPSKIMKAVYQNISESNPAYEVFQTDTIEYGEILSFPESPSIEFKQFSTKHIQQYVENIIPEYISAFANTEGGYLFIGVDDKSRKVLGCAKEQVDPDSLKNVIARAISKLPIVHFCSSKPRVEYSTKIVEVFCGKELYGYLCVIKVKAFCCVVFSEAPKSWMVREKYIRPLTTEEWVEKMMDADPEFPPDFAEAFESQLSLSDSPSLCRPVYSKKGLEHKADLQQHLFPVPPGHLECTPESLWKELSLQHEGLKELIHKQMRPFSQGIVILSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILREQDAEGQDYCTRTAFTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYPASYSLAGTQHMEALLQSLVIVLLGFRSLLSDQLGCEVLNLLTAQQYEIFSRSLRKNRELFVHGLPGSGKTIMAMKIMEKIRNVFHCEAHRILYVCENQPLRNFISDRNICRAETRETFLREKFEHIQHIVIDEAQNFRTEDGDWYRKAKTITQREKDCPGVLWIFLDYFQTSHLGHSGLPPLSAQYPREELTRVVRNADEIAEYIQQEMQLIIENPPINIPHGYLAILSEAKWVPGVPGNTKIIKNFTLEQIVTYVADTCRCFFERGYSPKDVAVLVSTVTEVEQYQSKLLKAMRKKMVVQLSDACDMLGVHIVLDSVRRFSGLERSIVFGIHPRTADPAILPNILICLASRAKQHLYIFL*