ENST00000452764.3 SLFN12

Information
Transcript ID
ENST00000452764.3
Genome
hg19
Position
chr17:33,738,090-33,760,302
Strand
-
CDS length
1,737
Amino acid length
579
Gene symbol
SLFN12
Gene type
protein-coding
Gene description
schlafen family member 12
Gene Entrez Gene ID
55106
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 33,738,090 33,738,946
3 33,747,293 33,747,400
2 33,749,009 33,750,087
1 33,759,924 33,760,302
CDS
Exon number Type Start Stop
4 CDS 33,738,357 33,738,946
3 CDS 33,747,293 33,747,400
2 CDS 33,749,009 33,750,047
Other genome
Genome Chromosome Start End Links
hg38 chr17 35,411,071 35,433,283 Link
CDS sequence
ATGAACATCAGTGTTGATTTGGAAACGAATTATGCCGAGTTGGTTCTAGATGTGGGAAGAGTCACTCTTGGAGAGAACAGTAGGAAAAAAATGAAGGATTGTAAACTGAGAAAAAAGCAGAATGAAAGTGTCTCACGAGCTATGTGTGCTCTGCTCAATTCTGGAGGGGGAGTGATCAAGGCTGAAATTGAGAATGAAGACTATAGTTATACAAAAGATGGAATAGGACTAGATTTGGAAAATTCTTTTAGTAACATTCTGTTATTTGTTCCTGAGTACTTAGACTTCATGCAGAATGGTAACTACTTTCTGATTTTTGTGAAGTCATGGAGCTTGAACACCTCTGGTCTGCGGATTACCACCTTGAGCTCCAATTTGTACAAAAGAGATATAACATCTGCAAAAGTCATGAATGCCACTGCTGCACTGGAGTTCCTCAAAGACATGAAAAAGACTAGAGGGAGATTGTATTTAAGACCAGAATTGCTGGCAAAGAGGCCCTGTGTTGATATACAAGAAGAAAATAACATGAAGGCCTTGGCCGGGGTTTTTTTTGATAGAACAGAACTTGATCGGAAAGAAAAATTGACCTTTACTGAATCCACACATGTTGAAATTAAAAACTTCTCGACAGAAAAGTTGTTACAACGAATTAAAGAGATTCTCCCTCAATATGTTTCTGCATTTGCAAATACTGATGGAGGATATTTGTTCATTGGTTTAAATGAAGATAAAGAAATAATTGGCTTTAAAGCAGAGATGAGTGACCTCGATGACTTAGAAAGAGAAATCGAAAAGTCCATTAGGAAGATGCCTGTGCATCACTTCTGTATGGAGAAGAAGAAGATAAATTATTCATGCAAATTCCTTGGAGTATATGATAAAGGAAGTCTTTGTGGATATGTCTGTGCACTCAGAGTGGAGCGCTTCTGCTGTGCAGTGTTTGCTAAAGAGCCTGATTCCTGGCATGTGAAAGATAACCGTGTGATGCAGTTGACCAGGAAGGAATGGATCCAGTTCATGGTGGAGGCTGAACCAAAATTTTCCAGTTCATATGAAGAGGTGATCTCTCAAATAAATACGTCATTACCTGCTCCCCACAGTTGGCCTCTTTTGGAATGGCAACGGCAGAGACATCACTGTCCAGGGCTATCAGGAAGGATAACGTATACTCCAGAAAACCTTTGCAGAAAACTGTTCTTACAACATGAAGGACTTAAGCAATTAATATGTGAAGAAATGGACTCTGTCAGAAAGGGCTCACTGATCTTCTCTAGGAGCTGGTCTGTGGATCTGGGCTTGCAAGAGAACCACAAAGTCCTCTGTGATGCTCTTCTGATTTCCCAGGACAGTCCTCCAGTCCTATACACCTTCCACATGGTACAGGATGAGGAGTTTAAAGGCTATTCTACACAAACTGCCCTAACCTTAAAGCAGAAGCTGGCAAAAATTGGTGGTTACACTAAAAAAGTGTGTGTCATGACAAAGATCTTCTACTTGAGCCCTGAAGGCATGACAAGCTGCCAGTATGATTTAAGGTCGCAAGTAATTTACCCTGAATCCTACTATTTTACAAGAAGGAAATACTTGCTGAAAGCCCTTTTTAAAGCCTTAAAGAGACTCAAGTCTCTGAGAGACCAGTTTTCCTTTGCAGAAAATCTATACCAGATAATCGGTATAGATTGCTTTCAGAAGAATGATAAAAAGATGTTTAAATCTTGTCGAAGGCTCACCTGA
Amino sequence
MNISVDLETNYAELVLDVGRVTLGENSRKKMKDCKLRKKQNESVSRAMCALLNSGGGVIKAEIENEDYSYTKDGIGLDLENSFSNILLFVPEYLDFMQNGNYFLIFVKSWSLNTSGLRITTLSSNLYKRDITSAKVMNATAALEFLKDMKKTRGRLYLRPELLAKRPCVDIQEENNMKALAGVFFDRTELDRKEKLTFTESTHVEIKNFSTEKLLQRIKEILPQYVSAFANTDGGYLFIGLNEDKEIIGFKAEMSDLDDLEREIEKSIRKMPVHHFCMEKKKINYSCKFLGVYDKGSLCGYVCALRVERFCCAVFAKEPDSWHVKDNRVMQLTRKEWIQFMVEAEPKFSSSYEEVISQINTSLPAPHSWPLLEWQRQRHHCPGLSGRITYTPENLCRKLFLQHEGLKQLICEEMDSVRKGSLIFSRSWSVDLGLQENHKVLCDALLISQDSPPVLYTFHMVQDEEFKGYSTQTALTLKQKLAKIGGYTKKVCVMTKIFYLSPEGMTSCQYDLRSQVIYPESYYFTRRKYLLKALFKALKRLKSLRDQFSFAENLYQIIGIDCFQKNDKKMFKSCRRLT*