ENST00000394562.5 SLFN12

Information
Transcript ID
ENST00000394562.5
Genome
hg19
Position
chr17:33,738,079-33,760,215
Strand
-
CDS length
1,737
Amino acid length
579
Gene symbol
SLFN12
Gene type
protein-coding
Gene description
schlafen family member 12
Gene Entrez Gene ID
55106
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 33,738,079 33,738,946
5 33,747,293 33,747,400
4 33,749,009 33,750,087
3 33,757,490 33,757,611
2 33,759,207 33,759,276
1 33,759,924 33,760,215
CDS
Exon number Type Start Stop
6 CDS 33,738,357 33,738,946
5 CDS 33,747,293 33,747,400
4 CDS 33,749,009 33,750,047
Other genome
Genome Chromosome Start End Links
hg38 chr17 35,411,060 35,433,196 Link
CDS sequence
ATGAACATCAGTGTTGATTTGGAAACGAATTATGCCGAGTTGGTTCTAGATGTGGGAAGAGTCACTCTTGGAGAGAACAGTAGGAAAAAAATGAAGGATTGTAAACTGAGAAAAAAGCAGAATGAAAGTGTCTCACGAGCTATGTGTGCTCTGCTCAATTCTGGAGGGGGAGTGATCAAGGCTGAAATTGAGAATGAAGACTATAGTTATACAAAAGATGGAATAGGACTAGATTTGGAAAATTCTTTTAGTAACATTCTGTTATTTGTTCCTGAGTACTTAGACTTCATGCAGAATGGTAACTACTTTCTGATTTTTGTGAAGTCATGGAGCTTGAACACCTCTGGTCTGCGGATTACCACCTTGAGCTCCAATTTGTACAAAAGAGATATAACATCTGCAAAAGTCATGAATGCCACTGCTGCACTGGAGTTCCTCAAAGACATGAAAAAGACTAGAGGGAGATTGTATTTAAGACCAGAATTGCTGGCAAAGAGGCCCTGTGTTGATATACAAGAAGAAAATAACATGAAGGCCTTGGCCGGGGTTTTTTTTGATAGAACAGAACTTGATCGGAAAGAAAAATTGACCTTTACTGAATCCACACATGTTGAAATTAAAAACTTCTCGACAGAAAAGTTGTTACAACGAATTAAAGAGATTCTCCCTCAATATGTTTCTGCATTTGCAAATACTGATGGAGGATATTTGTTCATTGGTTTAAATGAAGATAAAGAAATAATTGGCTTTAAAGCAGAGATGAGTGACCTCGATGACTTAGAAAGAGAAATCGAAAAGTCCATTAGGAAGATGCCTGTGCATCACTTCTGTATGGAGAAGAAGAAGATAAATTATTCATGCAAATTCCTTGGAGTATATGATAAAGGAAGTCTTTGTGGATATGTCTGTGCACTCAGAGTGGAGCGCTTCTGCTGTGCAGTGTTTGCTAAAGAGCCTGATTCCTGGCATGTGAAAGATAACCGTGTGATGCAGTTGACCAGGAAGGAATGGATCCAGTTCATGGTGGAGGCTGAACCAAAATTTTCCAGTTCATATGAAGAGGTGATCTCTCAAATAAATACGTCATTACCTGCTCCCCACAGTTGGCCTCTTTTGGAATGGCAACGGCAGAGACATCACTGTCCAGGGCTATCAGGAAGGATAACGTATACTCCAGAAAACCTTTGCAGAAAACTGTTCTTACAACATGAAGGACTTAAGCAATTAATATGTGAAGAAATGGACTCTGTCAGAAAGGGCTCACTGATCTTCTCTAGGAGCTGGTCTGTGGATCTGGGCTTGCAAGAGAACCACAAAGTCCTCTGTGATGCTCTTCTGATTTCCCAGGACAGTCCTCCAGTCCTATACACCTTCCACATGGTACAGGATGAGGAGTTTAAAGGCTATTCTACACAAACTGCCCTAACCTTAAAGCAGAAGCTGGCAAAAATTGGTGGTTACACTAAAAAAGTGTGTGTCATGACAAAGATCTTCTACTTGAGCCCTGAAGGCATGACAAGCTGCCAGTATGATTTAAGGTCGCAAGTAATTTACCCTGAATCCTACTATTTTACAAGAAGGAAATACTTGCTGAAAGCCCTTTTTAAAGCCTTAAAGAGACTCAAGTCTCTGAGAGACCAGTTTTCCTTTGCAGAAAATCTATACCAGATAATCGGTATAGATTGCTTTCAGAAGAATGATAAAAAGATGTTTAAATCTTGTCGAAGGCTCACCTGA
Amino sequence
MNISVDLETNYAELVLDVGRVTLGENSRKKMKDCKLRKKQNESVSRAMCALLNSGGGVIKAEIENEDYSYTKDGIGLDLENSFSNILLFVPEYLDFMQNGNYFLIFVKSWSLNTSGLRITTLSSNLYKRDITSAKVMNATAALEFLKDMKKTRGRLYLRPELLAKRPCVDIQEENNMKALAGVFFDRTELDRKEKLTFTESTHVEIKNFSTEKLLQRIKEILPQYVSAFANTDGGYLFIGLNEDKEIIGFKAEMSDLDDLEREIEKSIRKMPVHHFCMEKKKINYSCKFLGVYDKGSLCGYVCALRVERFCCAVFAKEPDSWHVKDNRVMQLTRKEWIQFMVEAEPKFSSSYEEVISQINTSLPAPHSWPLLEWQRQRHHCPGLSGRITYTPENLCRKLFLQHEGLKQLICEEMDSVRKGSLIFSRSWSVDLGLQENHKVLCDALLISQDSPPVLYTFHMVQDEEFKGYSTQTALTLKQKLAKIGGYTKKVCVMTKIFYLSPEGMTSCQYDLRSQVIYPESYYFTRRKYLLKALFKALKRLKSLRDQFSFAENLYQIIGIDCFQKNDKKMFKSCRRLT*