ENST00000621161.5 RAB11FIP4
Information
- Transcript ID
- ENST00000621161.5
- Genome
- hg19
- Position
- chr17:29,718,693-29,865,230
- Strand
- +
- CDS length
- 1,914
- Amino acid length
- 638
- Gene symbol
- RAB11FIP4
- Gene type
- protein-coding
- Gene description
- RAB11 family interacting protein 4
- Gene Entrez Gene ID
- 84440
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 29,718,693 | 29,719,029 |
| 2 | 29,758,831 | 29,758,918 |
| 3 | 29,761,052 | 29,761,140 |
| 4 | 29,844,669 | 29,844,895 |
| 5 | 29,848,184 | 29,848,378 |
| 6 | 29,848,933 | 29,849,067 |
| 7 | 29,849,378 | 29,849,413 |
| 8 | 29,850,530 | 29,850,629 |
| 9 | 29,850,911 | 29,851,014 |
| 10 | 29,852,108 | 29,852,248 |
| 11 | 29,854,860 | 29,854,941 |
| 12 | 29,855,424 | 29,855,561 |
| 13 | 29,855,638 | 29,855,796 |
| 14 | 29,857,344 | 29,857,487 |
| 15 | 29,858,634 | 29,865,230 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 29,718,871 | 29,719,029 |
| 2 | CDS | 29,758,831 | 29,758,918 |
| 3 | CDS | 29,761,052 | 29,761,140 |
| 4 | CDS | 29,844,669 | 29,844,895 |
| 5 | CDS | 29,848,184 | 29,848,378 |
| 6 | CDS | 29,848,933 | 29,849,067 |
| 7 | CDS | 29,849,378 | 29,849,413 |
| 8 | CDS | 29,850,530 | 29,850,629 |
| 9 | CDS | 29,850,911 | 29,851,014 |
| 10 | CDS | 29,852,108 | 29,852,248 |
| 11 | CDS | 29,854,860 | 29,854,941 |
| 12 | CDS | 29,855,424 | 29,855,561 |
| 13 | CDS | 29,855,638 | 29,855,796 |
| 14 | CDS | 29,857,344 | 29,857,487 |
| 15 | CDS | 29,858,634 | 29,858,750 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 31,391,675 | 31,538,211 | Link |
CDS sequence
ATGGCGGGCGGCGCGGGCTGGTCGGGCGCCCCCGCGGCTCTGCTGCGCTCCGTGCGCCGCCTGCGCGAGGTGTTCGAGGTGTGCGGCCGCGACCCCGACGGCTTCCTGCGCGTGGAGCGCGTCGCGGCGCTCGGACTGCGCTTCGGCCAGGGCGAGGAGGTGGAAAAACTTGTGAAATATTTGGATCCCAACGACCTGGGGAGAATCAACTTCAAGGACTTTTGCCGGGGGGTGTTCGCCATGAAAGGGTGCGAGGAGCTGCTGAAGGATGTGCTGTCGGTGGAGAGCGCGGGGACGCTGCCGTGCGCGCCAGAGATCCCAGACTGCGTGGAGCAGGGCAGCGAGGTCACAGGCCCCACCTTTGCTGATGGCGAGCTCATCCCCAGGGAACCCGGCTTTTTTCCCGAGGACGAGGAGGAGGCTATGACGCTGGCGCCACCTGAGGGCCCCCAGGAGTTGTACACAGACAGCCCCATGGAGAGCACTCAGAGCCTGGAGGGGTCTGTCGGGAGTCCTGCCGAGAAGGACGGGGGACTTGGGGGCCTGTTTCTGCCAGAAGACAAGTCCCTGGTCCACACTCCATCCATGACGACCTCAGACCTTTCTACACACTCCACCACCTCGCTCATCAGCAATGAGGAGCAGTTTGAAGACTATGGGGAGGGTGACGATGTGGACTGTGCCCCCAGCAGCCCTTGCCCCGATGATGAGACCAGGACCAACGTCTACTCGGACCTGGGGTCTTCGGTGTCTTCCAGTGCGGGGCAGACGCCTAGGAAAATGCGGCACGTGTACAACAGCGAATTGCTAGATGTTTACTGCTCTCAATGCTGCAAGAAAATCAACCTGCTCAATGACTTGGAAGCCCGACTGAAAAACCTGAAGGCCAACAGCCCCAACCGAAAGATCTCCAGCACGGCCTTTGGACGGCAGCTCATGCACAGCAGCAACTTCAGCAGCAGCAATGGCAGCACCGAAGACCTGTTCCGGGACAGCATTGACTCTTGCGACAATGACATCACAGAGAAGGTAAGCTTCCTGGAAAAGAAGGTGACAGAGCTGGAGAATGACAGCCTGACCAATGGGGACCTGAAGAGCAAGCTGAAGCAAGAGAACACACAGCTGGTGCACAGGGTGCATGAGCTGGAGGAGATGGTGAAGGATCAGGAGACCACGGCCGAGCAGGCTCTGGAGGAGGAGGCGCGGCGCCACCGCGAGGCCTACGGCAAGCTGGAGAGGGAGAAGGCTACCGAGGTGGAGCTGCTCAATGCCAGGGTGCAGCAGTTGGAGGAAGAAAATACAGAGCTTAGAACAACAGTGACTCGGCTCAAGTCTCAAACAGAGAAACTGGATGAGGAGCGGCAGCGCATGTCTGACCGTCTGGAGGACACCAGCCTGCGGCTCAAAGATGAGATGGACCTGTACAAGCGCATGATGGACAAGCTGCGACAGAACCGCCTTGAGTTCCAGAAGGAGCGGGAGGCGACGCAGGAGCTCATCGAGGACTTGCGGAAGGAGCTGGAGCACCTGCAGATGTACAAGCTGGACTGCGAGCGGCCAGGCAGGGGCCGCAGTGCCTCCTCTGGCCTAGGCGAGTTCAATGCCAGGGCCCGCGAGGTGGAGCTCGAGCACGAGGTCAAGCGGCTCAAGCAGGAGAATTATAAGCTGCGGGATCAGAACGACGACTTGAATGGGCAGATTTTGAGCCTCAGCCTCTACGAAGCAAAAAACCTCTTTGCTGCCCAGACTAAAGCCCAGTCTCTGGCTGCGGAGATAGACACCGCCTCGCGCGATGAGCTAATGGAAGCCCTGAAGGAGCAGGAGGAGATCAACTTCCGGCTGAGGCAGTACATGGACAAGATTATCCTCGCCATCCTGGACCACAATCCCTCCATCCTCGAGATCAAACACTAA
Amino sequence
MAGGAGWSGAPAALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVESAGTLPCAPEIPDCVEQGSEVTGPTFADGELIPREPGFFPEDEEEAMTLAPPEGPQELYTDSPMESTQSLEGSVGSPAEKDGGLGGLFLPEDKSLVHTPSMTTSDLSTHSTTSLISNEEQFEDYGEGDDVDCAPSSPCPDDETRTNVYSDLGSSVSSSAGQTPRKMRHVYNSELLDVYCSQCCKKINLLNDLEARLKNLKANSPNRKISSTAFGRQLMHSSNFSSSNGSTEDLFRDSIDSCDNDITEKVSFLEKKVTELENDSLTNGDLKSKLKQENTQLVHRVHELEEMVKDQETTAEQALEEEARRHREAYGKLEREKATEVELLNARVQQLEEENTELRTTVTRLKSQTEKLDEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHLQMYKLDCERPGRGRSASSGLGEFNARAREVELEHEVKRLKQENYKLRDQNDDLNGQILSLSLYEAKNLFAAQTKAQSLAAEIDTASRDELMEALKEQEEINFRLRQYMDKIILAILDHNPSILEIKH*