ENST00000538566.6 TMIGD1
Information
- Transcript ID
- ENST00000538566.6
- Genome
- hg19
- Position
- chr17:28,643,351-28,661,077
- Strand
- -
- CDS length
- 657
- Amino acid length
- 219
- Gene symbol
- TMIGD1
- Gene type
- protein-coding
- Gene description
- transmembrane and immunoglobulin domain containing 1
- Gene Entrez Gene ID
- 388364
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 28,643,351 | 28,643,708 |
| 5 | 28,644,211 | 28,644,251 |
| 4 | 28,651,834 | 28,652,112 |
| 3 | 28,656,269 | 28,656,547 |
| 2 | 28,659,070 | 28,659,176 |
| 1 | 28,661,018 | 28,661,077 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 28,644,235 | 28,644,251 |
| 4 | CDS | 28,651,834 | 28,652,112 |
| 3 | CDS | 28,656,269 | 28,656,547 |
| 2 | CDS | 28,659,070 | 28,659,151 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 30,316,333 | 30,334,059 | Link |
CDS sequence
ATGGCATGGAAGAGCAGTGTCATAATGCAAATGGGAAGATTTCTTCTCTTAGTAATTTTATTTCTGCCACGTGAGATGACAAGTTCTGTTTTAACTGTGAATGGTAAAACTGAGAACTATATCCTGGATACTACACCTGGCTCCCAAGCATCTCTGATATGTGCTGTTCAAAACCACACCAGAGAGGAAGAACTGCTCTGGTACCGAGAGGAGGGGAGAGTGGATTTGAAATCTGGAAACAAAATCAATTCCAGCTCTGTCTGTGTCTCTTCCATCAGTGAAAATGACAACGGAATCAGCTTTACCTGCAGGCTGGGGAGGGATCAGTCCGTGTCCGTTTCGGTGGTGCTGAATGTTACTTTTCCTCCTCTCCTAAGTGGAAACGACTTCCAAACAGTTGAGGAAGGCAGTAATGTGAAGTTGGTTTGCAATGTGAAAGCCAACCCCCAGGCTCAAATGATGTGGTACAAAAACAGTAGTCTCCTCGATTTAGAGAAAAGCCGTCACCAAATCCAACAGACAAGTGAGTCTTTTCAGCTGTCAATCACCAAAGTCGAGAAGCCTGACAACGGAACCTACAGTTGTATTGCAAAGTCATCTCTGAAAACGGAGAGCTTGGACTTTCACCTGATTGTTAAAGCTCTGCATGAAGGATAA
Amino sequence
MAWKSSVIMQMGRFLLLVILFLPREMTSSVLTVNGKTENYILDTTPGSQASLICAVQNHTREEELLWYREEGRVDLKSGNKINSSSVCVSSISENDNGISFTCRLGRDQSVSVSVVLNVTFPPLLSGNDFQTVEEGSNVKLVCNVKANPQAQMMWYKNSSLLDLEKSRHQIQQTSESFQLSITKVEKPDNGTYSCIAKSSLKTESLDFHLIVKALHEG*