ENST00000515340.2 SPDYE16
Information
- Transcript ID
- ENST00000515340.2
- Genome
- hg38
- Position
- chr7:76,533,694-76,540,386
- Strand
- -
- CDS length
- 858
- Amino acid length
- 286
- Gene symbol
- SPDYE16
- Gene type
- protein-coding
- Gene description
- speedy/RINGO cell cycle regulator family member E16
- Gene Entrez Gene ID
- 102723555
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 76,533,694 | 76,533,753 |
| 6 | 76,533,876 | 76,533,975 |
| 5 | 76,534,057 | 76,534,119 |
| 4 | 76,536,172 | 76,536,257 |
| 3 | 76,537,493 | 76,537,551 |
| 2 | 76,538,586 | 76,538,816 |
| 1 | 76,540,128 | 76,540,386 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 76,533,694 | 76,533,753 |
| 6 | CDS | 76,533,876 | 76,533,975 |
| 5 | CDS | 76,534,057 | 76,534,119 |
| 4 | CDS | 76,536,172 | 76,536,257 |
| 3 | CDS | 76,537,493 | 76,537,551 |
| 2 | CDS | 76,538,586 | 76,538,816 |
| 1 | CDS | 76,540,128 | 76,540,386 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr7 | 76,163,011 | 76,169,703 | Link |
CDS sequence
ATGCAGAAGCATTACACGGTGGCCTGGTTTCTTTACTCAGCCCCTGGGGTAGATCCCAGCCCCCCATGTAGGTCCCTTGGCTGGAAAAGGAAGAAGGAGTGGTCAGATGAATCTGAGGAGGAGCCGGAGAAGGAGCTCGCCCCTGAGCCTGAGGAGACCTGGGTAGTGGAGATGCTGTGTGGGCTCAAGATGAAGCTGAAGCAACAGCGAGTGTCACCCATCCTCCCTGAGCACCACAAGGACTTCAACAGTCAGCTTGCCCCTGGGGTAGATCCCAGCCCCCCGCATAGGTCCTTTTGCTGGAAAAGGAAGAGGGAGTGGTGGGACGAATCTGAGGAGTCGTTGGAGGAGGAGCCACGGAAGGTGCTCGCCCCTGAGCCTGAGGAGATCTGGGTGGTGGAGATGCTGTGTGGCCTCAAGATGAAGCTGAAGCGACGGCGAGTGTCGCTCGTGCTCCCTGAGCACCACGAGGCCTTCAACAGGCTGCTTGAGGATCCTGTCATTAAAAGATTCCTGGCCTGGGACAAAGATCTGAGGGTGTCGGACAAGTATCTCCTGGCTATGGTCATAGCGTATTTCAGCCGGGCCGGCCTCCCCTCCTGGCAATACCAACGCATTCATTTCTTCCTGGCTCTCTACCTGGCCAATGACATGGAGGAGGACGACGAGGACCCCAAACAAAACATCTTCTACTTCCTGAAGAACCGCTCTCAGATAGCCCTGTTCCAGAAACTTCGGTTCCAGTTCTTCTGTTCCATGAGCGGCAGGGCTTGGGTTTCCCGGGAGGAGTTGGAGGAGATCCAGGCTTATGACCCAGAGCACTGGGTGTGGGCGCGAGATCGCGCTCGCCTTTCCTAG
Amino sequence
MQKHYTVAWFLYSAPGVDPSPPCRSLGWKRKKEWSDESEEEPEKELAPEPEETWVVEMLCGLKMKLKQQRVSPILPEHHKDFNSQLAPGVDPSPPHRSFCWKRKREWWDESEESLEEEPRKVLAPEPEEIWVVEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEDPKQNIFYFLKNRSQIALFQKLRFQFFCSMSGRAWVSREELEEIQAYDPEHWVWARDRARLS*