Information

Transcript ID: ENST00000353383.6
Genome: hg19
Position: chr17:17,584,772-17,714,767
Strand: +
CDS length: 5,721
Amino acid length: 1,907
Gene symbol: RAI1
Gene type: protein-coding
Gene description: retinoic acid induced 1
Gene Entrez Gene ID: 10743

Variants

Display target variant

MGeND data only All data

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Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

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Target data	:	MGeND data only
Category	:
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Exon

Exon number	Start	Stop
1	17,584,772	17,585,107
2	17,627,342	17,627,473
3	17,696,247	17,701,827
4	17,707,070	17,707,163
5	17,712,704	17,712,753
6	17,713,284	17,714,767

CDS

Exon number	Type	Start	Stop
3	CDS	17,696,263	17,701,827
4	CDS	17,707,070	17,707,163
5	CDS	17,712,704	17,712,753
6	CDS	17,713,284	17,713,295

Other genome

Genome	Chromosome	Start	End	Links
hg38	chr17	17,681,458	17,811,453	Link

CDS sequence

ATGCAGTCTTTTCGAGAAAGGTGTGGTTTCCATGGCAAACAACAGAACTACCAGCAGACCTCGCAGGAAACATCACGCCTAGAGAATTACAGGCAGCCGAGTCAGGCCGGGCTAAGCTGCGACCGGCAGCGGCTGCTCGCCAAGGACTATTATAACCCGCAGCCTTACCCGAGCTATGAGGGTGGCGCTGGCACGCCCTCTGGCACTGCAGCCGCGGTGGCCGCCGACAAGTACCACCGAGGCAGCAAGGCCCTGCCCACACAGCAAGGCCTGCAGGGGAGGCCGGCTTTCCCTGGCTACGGCGTCCAGGACAGCAGCCCCTACCCAGGCCGCTATGCTGGTGAGGAGAGCCTTCAGGCTTGGGGGGCCCCACAGCCACCACCCCCACAGCCGCAGCCACTACCTGCAGGGGTGGCCAAGTATGATGAGAACTTGATGAAAAAGACAGCAGTGCCCCCCAGCAGGCAGTATGCAGAGCAGGGCGCCCAGGTGCCCTTTCGGACTCACTCCCTGCACGTCCAGCAGCCACCGCCGCCCCAGCAGCCCCTGGCATACCCCAAGCTCCAAAGGCAGAAGCTGCAGAACGACATTGCCTCCCCTCTGCCCTTCCCCCAGGGTACCCACTTTCCTCAGCATTCCCAGTCCTTCCCCACCTCCTCCACCTACTCCTCCTCTGTCCAGGGTGGTGGGCAGGGGGCCCACTCCTATAAGAGTTGCACAGCACCGACTGCCCAGCCCCATGACAGGCCGCTGACTGCCAGCTCCAGCCTGGCCCCGGGGCAGCGGGTCCAGAATCTTCATGCCTACCAGTCGGGCCGCCTCAGCTATGACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCCCTTCAGAGCCGGCACCATGCCCAGGAAACCCTCCATTACCAAAACCTCGCCAAGTATCAGCACTACGGGCAGCAAGGCCAGGGCTACTGCCAGCCGGACGCAGCCGTCCGGACCCCAGAGCAGTACTACCAGACCTTCAGCCCCAGCTCCAGCCACTCACCCGCCCGCTCCGTGGGCCGCTCACCTTCCTACAGTTCCACACCGTCGCCGCTGATGCCAAACCTGGAGAACTTTCCCTACAGCCAGCAGCCGCTCAGCACCGGGGCCTTCCCCGCAGGGATCACTGACCACAGCCACTTCATGCCCCTGCTCAATCCCTCCCCAACGGATGCCACCAGCTCTGTGGACACCCAGGCTGGCAACTGCAAGCCCCTTCAGAAGGACAAGCTCCCTGAGAACCTGCTGTCGGATCTCAGCCTGCAGAGCCTCACGGCGCTGACCTCACAGGTGGAGAACATCTCCAACACCGTCCAGCAGCTGCTGCTCTCCAAGGCTGCTGTGCCGCAGAAGAAAGGTGTCAAGAACCTCGTGTCCAGGACCCCAGAGCAGCATAAAAGCCAGCACTGCAGCCCCGAAGGGAGCGGCTACTCAGCCGAGCCCGCAGGCACACCGCTGTCAGAGCCGCCGAGCAGCACGCCACAGTCCACGCATGCGGAGCCGCAGGAGGCCGACTACCTGAGCGGCTCCGAGGACCCACTGGAGCGCAGCTTCCTCTACTGCAACCAGGCCCGTGGCAGCCCTGCCAGGGTCAACAGCAACTCGAAGGCCAAGCCCGAGTCCGTGTCCACCTGTTCTGTGACCTCTCCTGACGACATGTCCACCAAATCTGACGACTCCTTCCAGAGCCTACACGGCAGTCTGCCGCTCGACAGCTTCTCCAAGTTCGTGGCGGGTGAGCGGGACTGTCCGCGGCTGCTGCTCAGCGCCCTGGCACAGGAGGACCTGGCCTCCGAGATCCTGGGGCTGCAGGAAGCCATCGGTGAGAAGGCCGACAAAGCTTGGGCTGAAGCACCCAGCCTGGTCAAGGACAGCAGCAAGCCACCCTTCTCGCTGGAGAACCACAGCGCCTGCCTGGACTCTGTGGCCAAGAGTGCGTGGCCCCGGCCTGGGGAGCCGGAGGCCCTGCCCGACTCCTTGCAGCTGGACAAGGGCGGCAATGCCAAGGACTTCAGCCCAGGGCTGTTTGAAGACCCTTCCGTGGCCTTCGCTACGCCTGACCCCAAAAAGACAACTGGTCCTCTCTCCTTTGGTACCAAGCCCACCCTTGGGGTTCCTGCTCCAGACCCCACTACAGCAGCTTTTGACTGTTTCCCGGACACAACCGCTGCCAGCTCAGCGGACAGCGCCAACCCCTTTGCCTGGCCAGAGGAAAACCTGGGGGATGCTTGTCCCAGGTGGGGATTGCACCCTGGCGAGCTTACCAAGGGCCTGGAGCAGGGTGGGAAGGCCTCAGATGGCATCAGCAAAGGGGACACCCATGAGGCTTCGGCCTGCCTGGGCTTCCAGGAGGAGGACCCCCCTGGGGAGAAGGTGGCCTCGTTGCCCGGGGACTTCAAGCAGGAGGAGGTGGGTGGGGTGAAGGAGGAGGCAGGTGGGCTGCTGCAGTGCCCCGAGGTGGCCAAGGCTGACCGGTGGCTGGAGGACAGCCGGCACTGCTGTTCCACCGCCGACTTCGGGGACCTCCCACTGCTGCCACCCACCAGCAGGAAGGAGGACCTGGAAGCTGAGGAGGAGTACTCCTCCCTATGTGAGCTCCTGGGCAGCCCCGAGCAGAGGCCTGGCATGCAGGACCCGCTGTCACCCAAGGCCCCACTCATCTGCACCAAGGAGGAGGTGGAGGAGGTGCTGGACTCCAAGGCCGGCTGGGGCTCTCCGTGCCACCTCTCAGGGGAGTCCGTCATCCTGCTGGGCCCTACAGTGGGCACCGAGTCAAAGGTCCAGAGCTGGTTTGAGTCCTCTCTGTCACACATGAAGCCAGGTGAAGAGGGGCCTGATGGGGAGCGAGCTCCAGGGGATTCCACCACCTCGGACGCCTCTCTGGCCCAGAAGCCCAACAAGCCTGCTGTGCCCGAGGCGCCCATCGCAAAGAAAGAGCCTGTGCCACGGGGCAAAAGCTTACGGAGCCGTCGGGTGCACCGGGGGCTGCCCGAGGCCGAGGACTCCCCATGCAGGGCACCAGTGCTGCCCAAAGACCTCTTGCTCCCTGAATCCTGCACAGGGCCCCCCCAGGGACAGATGGAAGGGGCTGGAGCCCCAGGCCGGGGGGCCTCGGAAGGGCTCCCCAGGATGTGTACTCGTTCTCTCACGGCCCTGAGTGAGCCCCGCACGCCCGGACCCCCAGGCCTGACCACCACCCCTGCACCCCCAGACAAACTGGGGGGCAAGCAGCGAGCCGCCTTCAAGTCGGGCAAGCGGGTGGGGAAGCCCTCACCCAAGGCTGCCTCCAGCCCCAGCAACCCGGCCGCCCTGCCTGTGGCCTCCGACAGCAGCCCGATGGGCTCCAAGACCAAGGAGACAGACTCACCCAGCACGCCTGGCAAGGACCAGCGCTCCATGATCCTTCGGTCACGCACCAAAACCCAGGAGATCTTCCACTCCAAGCGGCGGAGGCCCTCTGAGGGCCGGCTCCCCAACTGCCGTGCCACCAAGAAGCTCCTCGACAACAGCCACTTGCCCGCCACATTCAAGGTCTCCAGCAGCCCCCAGAAGGAGGGCAGGGTGAGCCAGCGGGCAAGGGTCCCCAAACCTGGTGCAGGCAGCAAGCTCTCTGACCGGCCCCTCCATGCGCTCAAAAGGAAGTCGGCCTTCATGGCGCCGGTCCCCACCAAGAAGCGGAACCTGGTCTTGCGGAGCCGCAGCAGCAGCAGCAGCAACGCCAGTGGCAATGGGGGAGATGGGAAGGAGGAGAGGCCTGAGGGTTCCCCCACCCTCTTCAAGAGGATGTCTTCTCCCAAGAAAGCCAAGCCCACCAAGGGCAATGGCGAGCCTGCCACAAAGCTCCCACCCCCGGAGACCCCCGATGCCTGCCTCAAGCTCGCCTCTCGGGCAGCCTTCCAGGGGGCCATGAAGACCAAGGTGCTGCCACCCCGGAAGGGCCGGGGCCTGAAGCTGGAAGCCATCGTGCAGAAGATCACCTCGCCCAGCCTCAAGAAGTTCGCATGTAAAGCGCCAGGGGCCTCTCCTGGTAATCCTCTGAGCCCATCCCTTTCCGACAAAGACCGTGGGCTCAAGGGTGCTGGGGGCAGCCCAGTGGGGGTGGAAGAAGGCCTGGTAAATGTGGGCACCGGGCAGAAGCTCCCAACTTCTGGGGCTGATCCGTTATGCAGAAATCCAACCAACAGATCCTTAAAAGGCAAACTCATGAACAGTAAGAAACTGTCTTCTACTGACTGTTTCAAAACCGAGGCCTTCACATCCCCGGAGGCCCTGCAGCCTGGGGGGACTGCCCTGGCGCCTAAGAAGAGGAGCCGGAAAGGCCGGGCAGGGGCCCATGGACTCTCCAAAGGCCCGCTGGAGAAGCGGCCCTATCTTGGCCCGGCTCTGCTCCTGACTCCCCGAGACAGGGCCAGTGGCACACAAGGGGCCAGTGAGGACAACTCTGGTGGAGGAGGCAAGAAGCCAAAGATGGAGGAGCTGGGCCTGGCCTCCCAGCCCCCGGAGGGCAGGCCCTGCCAGCCCCAGACAAGGGCACAGAAACAGCCAGGCCACACCAACTACAGCAGCTATTCCAAGCGGAAGCGCCTCACTCGGGGCCGGGCCAAGAACACCACCTCTTCACCCTGTAAGGGGCGTGCCAAGCGACGACGACAGCAGCAGGTGCTGCCCCTGGATCCCGCAGAGCCTGAAATCCGCCTCAAGTACATTTCCTCTTGCAAGCGGCTGAGGTCAGACAGCCGGACCCCCGCCTTCTCACCCTTCGTGCGGGTGGAGAAGCGAGACGCGTTCACCACCATATGCACTGTTGTCAACTCCCCTGGAGATGCGCCCAAGCCCCACAGGAAGCCTTCCTCCTCTGCCTCCTCTTCCTCATCCTCGTCCTCGTTCTCCTTGGATGCAGCCGGGGCCTCCCTGGCCACACTCCCTGGAGGCTCCATCCTGCAGCCGCGGCCCTCCTTGCCCCTCTCCTCCACGATGCACTTGGGGCCTGTGGTTTCCAAGGCCCTGAGTACCTCTTGCCTTGTTTGCTGCCTCTGCCAAAACCCGGCCAACTTCAAGGACCTTGGGGACCTCTGTGGGCCCTACTACCCTGAACACTGCCTCCCCAAAAAGAAGCCAAAACTCAAGGAGAAGGTGCGGCCAGAAGGCACCTGTGAGGAGGCCTCGCTGCCGCTTGAGAGAACACTCAAAGGTCCCGAGTGTGCAGCTGCCGCCACTGCCGGGAAGCCCCCCAGGCCTGACGGCCCAGCTGACCCGGCCAAGCAGGGCCCACTGCGCACCAGTGCCCGGGGCCTGTCCCGGAGGCTGCAGAGCTGCTACTGCTGTGATGGCCGGGAGGATGGGGGCGAGGAGGCAGCCCCAGCCGACAAGGGTCGCAAACATGAGTGCAGCAAGGAGGCTCCGGCAGAGCCCGGCGGGGAGGCCCAGGAGCACTGGGTGCATGAGGCCTGTGCCGTGTGGACCGGCGGCGTCTACCTGGTGGCCGGGAAGCTCTTTGGGCTGCAGGAGGCCATGAAGGTGGCCGTGGACATGATGTGTTCCAGCTGCCAAGAAGCCGGGGCCACCATTGGGTGCTGCCACAAAGGATGCCTCCACACCTACCACTACCCGTGTGCCAGCGATGCAGGTTGCATATTCATCGAAGAGAACTTTTCTTTGAAATGTCCCAAACATAAGAGGCTGCCGTAG

Amino sequence

MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYNPQPYPSYEGGAGTPSGTAAAVAADKYHRGSKALPTQQGLQGRPAFPGYGVQDSSPYPGRYAGEESLQAWGAPQPPPPQPQPLPAGVAKYDENLMKKTAVPPSRQYAEQGAQVPFRTHSLHVQQPPPPQQPLAYPKLQRQKLQNDIASPLPFPQGTHFPQHSQSFPTSSTYSSSVQGGGQGAHSYKSCTAPTAQPHDRPLTASSSLAPGQRVQNLHAYQSGRLSYDQQQQQQQQQQQQQQALQSRHHAQETLHYQNLAKYQHYGQQGQGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPLSTGAFPAGITDHSHFMPLLNPSPTDATSSVDTQAGNCKPLQKDKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGVKNLVSRTPEQHKSQHCSPEGSGYSAEPAGTPLSEPPSSTPQSTHAEPQEADYLSGSEDPLERSFLYCNQARGSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSLHGSLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEAIGEKADKAWAEAPSLVKDSSKPPFSLENHSACLDSVAKSAWPRPGEPEALPDSLQLDKGGNAKDFSPGLFEDPSVAFATPDPKKTTGPLSFGTKPTLGVPAPDPTTAAFDCFPDTTAASSADSANPFAWPEENLGDACPRWGLHPGELTKGLEQGGKASDGISKGDTHEASACLGFQEEDPPGEKVASLPGDFKQEEVGGVKEEAGGLLQCPEVAKADRWLEDSRHCCSTADFGDLPLLPPTSRKEDLEAEEEYSSLCELLGSPEQRPGMQDPLSPKAPLICTKEEVEEVLDSKAGWGSPCHLSGESVILLGPTVGTESKVQSWFESSLSHMKPGEEGPDGERAPGDSTTSDASLAQKPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPVLPKDLLLPESCTGPPQGQMEGAGAPGRGASEGLPRMCTRSLTALSEPRTPGPPGLTTTPAPPDKLGGKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPSTPGKDQRSMILRSRTKTQEIFHSKRRRPSEGRLPNCRATKKLLDNSHLPATFKVSSSPQKEGRVSQRARVPKPGAGSKLSDRPLHALKRKSAFMAPVPTKKRNLVLRSRSSSSSNASGNGGDGKEERPEGSPTLFKRMSSPKKAKPTKGNGEPATKLPPPETPDACLKLASRAAFQGAMKTKVLPPRKGRGLKLEAIVQKITSPSLKKFACKAPGASPGNPLSPSLSDKDRGLKGAGGSPVGVEEGLVNVGTGQKLPTSGADPLCRNPTNRSLKGKLMNSKKLSSTDCFKTEAFTSPEALQPGGTALAPKKRSRKGRAGAHGLSKGPLEKRPYLGPALLLTPRDRASGTQGASEDNSGGGGKKPKMEELGLASQPPEGRPCQPQTRAQKQPGHTNYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRRQQQVLPLDPAEPEIRLKYISSCKRLRSDSRTPAFSPFVRVEKRDAFTTICTVVNSPGDAPKPHRKPSSSASSSSSSSSFSLDAAGASLATLPGGSILQPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCEEASLPLERTLKGPECAAAATAGKPPRPDGPADPAKQGPLRTSARGLSRRLQSCYCCDGREDGGEEAAPADKGRKHECSKEAPAEPGGEAQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMMCSSCQEAGATIGCCHKGCLHTYHYPCASDAGCIFIEENFSLKCPKHKRLP*

ENST00000353383.6 RAI1

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