ENST00000579315.5 TNFRSF13B
Information
- Transcript ID
- ENST00000579315.5
- Genome
- hg19
- Position
- chr17:16,836,379-16,875,432
- Strand
- -
- CDS length
- 471
- Amino acid length
- 157
- Gene symbol
- TNFRSF13B
- Gene type
- protein-coding
- Gene description
- TNF receptor superfamily member 13B
- Gene Entrez Gene ID
- 23495
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 16,836,379 | 16,836,490 |
| 3 | 16,852,052 | 16,852,297 |
| 2 | 16,855,760 | 16,855,897 |
| 1 | 16,875,329 | 16,875,432 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 16,836,465 | 16,836,490 |
| 3 | CDS | 16,852,052 | 16,852,297 |
| 2 | CDS | 16,855,760 | 16,855,897 |
| 1 | CDS | 16,875,329 | 16,875,389 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 16,933,065 | 16,972,118 | Link |
CDS sequence
ATGAGTGGCCTGGGCCGGAGCAGGCGAGGTGGCCGGAGCCGTGTGGACCAGGAGGAGCGCTTTCCACAGGGCCTGTGGACGGGGGTGGCTATGAGATCCTGCCCCGAAGAGCAGTACTGGGATCCTCTGCTGGGTACCTGCATGTCCTGCAAAACCATTTGCAACCATCAGAGCCAGCGCACCTGTGCAGCCTTCTGCAGGTCACTCAGCTGCCGCAAGGAGCAAGGCAAGTTCTATGACCATCTCCTGAGGGACTGCATCAGCTGTGCCTCCATCTGTGGACAGCACCCTAAGCAATGTGCATACTTCTGTGAGAACAAGCTCAGGAGCCCAGTGAACCTTCCACCAGAGCTCAGGAGACAGCGGAGTGGAGAAGTTGAAAACAATTCAGACAACTCGGGAAGGTACCAAGGATTGGAGCACAGAGGCTCAGAAGCAAGTCCAGGAAAACGAAGCCCCCTCCTGTATTGA
Amino sequence
MSGLGRSRRGGRSRVDQEERFPQGLWTGVAMRSCPEEQYWDPLLGTCMSCKTICNHQSQRTCAAFCRSLSCRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCENKLRSPVNLPPELRRQRSGEVENNSDNSGRYQGLEHRGSEASPGKRSPLLY*