ENST00000396219.7 CFAP52

Information
Transcript ID
ENST00000396219.7
Genome
hg19
Position
chr17:9,479,944-9,546,699
Strand
+
CDS length
1,659
Amino acid length
553
Gene symbol
CFAP52
Gene type
protein-coding
Gene description
cilia and flagella associated protein 52
Gene Entrez Gene ID
146845
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 9,479,944 9,480,082
2 9,490,019 9,490,151
3 9,497,510 9,497,638
4 9,501,551 9,501,650
5 9,503,384 9,503,500
6 9,511,436 9,511,536
7 9,515,626 9,515,796
8 9,531,989 9,532,137
9 9,536,205 9,536,350
10 9,538,722 9,538,873
11 9,541,926 9,542,028
12 9,545,041 9,545,152
13 9,546,340 9,546,699
CDS
Exon number Type Start Stop
1 CDS 9,480,013 9,480,082
2 CDS 9,490,019 9,490,151
3 CDS 9,497,510 9,497,638
4 CDS 9,501,551 9,501,650
5 CDS 9,503,384 9,503,500
6 CDS 9,511,436 9,511,536
7 CDS 9,515,626 9,515,796
8 CDS 9,531,989 9,532,137
9 CDS 9,536,205 9,536,350
10 CDS 9,538,722 9,538,873
11 CDS 9,541,926 9,542,028
12 CDS 9,545,041 9,545,152
13 CDS 9,546,340 9,546,515
Other genome
Genome Chromosome Start End Links
hg38 chr17 9,576,627 9,643,382 Link
CDS sequence
ATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAACTTGACGCCGTGATCGGCTTCAATGACATCATTTTGTGGGATTATAAGAACAGAGAGCTGCTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGGCCTTTTCTCCAAATGATTTGTACTTGGTATCACTAGGAGGCCCAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTATGACTGCTGGAAATGGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAATAGTCATGAGTATTGGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGACAGATGTTGGGCCTGCGAAGGACAAATTCAGTTTGGGAGTGTCAGCTATCAGGTGCCTGAAGATGGGGGGTTTGTTGGTGGGCTCTGGAGCCGGACTGCTGGTCTTCTGTAAAAGCCCTGGCTACAAACCCATCAAGAAGATTCAGTTACAAGGCGGCATCACTTCTATCACACTTCGAGGAGAAGGACACCAGTTTCTCGTAGGAACAGAAGAATCGCACATTTATCGTGTCAGCTTCACGGATTTCAAAGAGACGCTCATAGCGACTTGTCACTTTGATGCTGTCGAGGATATTGTCTTTCCATTTGGCACTGCTGAGCTATTTGCAACCTGTGCCAAGAAGGATATCAGGGTGTGGCACACATCATCCAACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGACCTGCCACGGCATCGACTTCATGAGGGACGGCAAAAGCATCATTTCAGCATGGAACGACGGTAAAATCCGAGCCTTCGCCCCAGAGACAGGCCGACTGATGTATGTCATTAACAATGCTCACAGGATCGGCGTCACCGCCATCGCCACCACCAGTGACTGTAAAAGGGTCATCAGTGGCGGTGGGGAAGGGGAGGTGAGGGTATGGCAGATAGGCTGTCAGACCCAGAAGCTGGAGGAGGCCCTGAAGGAACACAAGTCATCAGTGTCCTGCATTAGGGTGAAGAGGAACAACGAGGAGTGTGTCACCGCCAGCACCGATGGGACTTGTATCATTTGGGACCTTGTGCGTCTCAGGAGGAATCAGATGATACTAGCCAACACCTTATTCCAGTGTGTGTGCTATCACCCTGAGGAGTTCCAGATCATCACCAGCGGAACAGACAGAAAGATTGCTTACTGGGAAGTATTTGATGGGACAGTAATCAGAGAATTGGAAGGTTCCCTGTCTGGGTCGATAAATGGCATGGATATCACACAGGAAGGGGTGCACTTTGTCACAGGTGGAAATGACCATCTGGTCAAAGTTTGGGATTATAATGAGGGTGAAGTGACTCACGTTGGGGTGGGACACAGTGGCAACATCACACGCATCCGCATAAGTCCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAGTACCCATATACCTCCTGA
Amino sequence
MDNKISPEAQVAELELDAVIGFNDIILWDYKNRELLARLSLHKGKIEALAFSPNDLYLVSLGGPDDGSVVVWSIAKRDAICGSPAAGLNVGNATNVIFSRCRDEMFMTAGNGTIRVWELDLPNRKIWPTECQTGQLKRIVMSIGVDDDDSFFYLGTTTGDILKMNPRTKLLTDVGPAKDKFSLGVSAIRCLKMGGLLVGSGAGLLVFCKSPGYKPIKKIQLQGGITSITLRGEGHQFLVGTEESHIYRVSFTDFKETLIATCHFDAVEDIVFPFGTAELFATCAKKDIRVWHTSSNRELLRITVPNMTCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVKRNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVWDYNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYPYTS*