ENST00000540486.5 TRAPPC1

Information
Transcript ID
ENST00000540486.5
Genome
hg19
Position
chr17:7,833,663-7,835,317
Strand
-
CDS length
438
Amino acid length
146
Gene symbol
TRAPPC1
Gene type
protein-coding
Gene description
trafficking protein particle complex subunit 1
Gene Entrez Gene ID
58485
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 7,833,663 7,834,052
4 7,834,329 7,834,467
3 7,834,824 7,834,894
2 7,835,049 7,835,147
1 7,835,258 7,835,317
CDS
Exon number Type Start Stop
5 CDS 7,833,924 7,834,052
4 CDS 7,834,329 7,834,467
3 CDS 7,834,824 7,834,894
2 CDS 7,835,049 7,835,147
Other genome
Genome Chromosome Start End Links
hg38 chr17 7,930,345 7,931,999 Link
CDS sequence
ATGACTGTCCACAACCTGTACCTGTTTGACCGGAATGGAGTGTGTCTGCACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAGGAGGAGTATAAGCTGATGTACGGGATGCTCTTCTCTATCCGCTCGTTTGTCAGCAAGATGTCCCCGCTAGACATGAAGGATGGCTTCCTGGCCTTCCAAACTAGCCGTTACAAACTCCATTACTACGAGACGCCCACTGGGATCAAAGTTGTCATGAATACTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGCACCACATCTACAGTGCGCTGTATGTGGAGCTGGTGGTGAAGAATCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTTCGCTCTCTGCCCTTCTTCTCCGCCCGGGCTGGCTGA
Amino sequence
MTVHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDGFLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQTVQSELFRSRLDSYVRSLPFFSARAG*