ENST00000320316.8 PHF23
Information
- Transcript ID
- ENST00000320316.8
- Genome
- hg19
- Position
- chr17:7,138,357-7,142,776
- Strand
- -
- CDS length
- 1,212
- Amino acid length
- 404
- Gene symbol
- PHF23
- Gene type
- protein-coding
- Gene description
- PHD finger protein 23
- Gene Entrez Gene ID
- 79142
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
5 | 7,138,357 | 7,139,159 |
4 | 7,139,249 | 7,140,086 |
3 | 7,140,704 | 7,140,796 |
2 | 7,140,948 | 7,140,979 |
1 | 7,142,565 | 7,142,776 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
5 | CDS | 7,138,945 | 7,139,159 |
4 | CDS | 7,139,249 | 7,140,086 |
3 | CDS | 7,140,704 | 7,140,796 |
2 | CDS | 7,140,948 | 7,140,979 |
1 | CDS | 7,142,565 | 7,142,598 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr17 | 7,235,038 | 7,239,457 | Link |
CDS sequence
ATGCTGGAAGCCATGGCGGAGCCCAGTCCCGAAGATCCACCTCCGACCCTTAAGCCAGAGACTCAGCCACCAGAGAAACGGCGGAGAACAATTGAGGATTTCAACAAATTCTGCAGTTTTGTTTTGGCATATGCTGGTTACATTCCCCCTAGCAAAGAGGAAAGTGACTGGCCAGCCTCTGGCTCCAGCTCTCCATTGCGAGGAGAGAGTGCGGCCGACAGTGATGGCTGGGACTCGGCCCCCTCAGATCTTCGAACCATCCAGACTTTTGTTAAGAAAGCAAAGTCATCCAAGAGAAGGGCAGCTCAAGCAGGTCCCACCCAGCCAGGACCCCCAAGGTCCACTTTCTCTCGTCTGCAGGCCCCCGACAGTGCTACCTTGCTTGAGAAGATGAAGCTCAAGGACTCTCTCTTTGATCTGGATGGGCCCAAAGTGGCATCTCCTTTGTCCCCCACATCCCTGACACATACCTCCCGGCCCCCTGCTGCTCTTACCCCCGTGCCCCTTTCCCAGGGGGACCTCTCCCATCCTCCTCGAAAGAAGGACCGAAAGAACCGAAAGTTGGGGCCAGGAGCTGGGGCTGGCTTTGGGGTGCTTCGGAGGCCTCGGCCAACTCCTGGGGATGGGGAAAAGAGATCTCGAATCAAGAAGAGCAAGAAGCGGAAGTTAAAAAAGGCAGAACGGGGGGATAGACTCCCACCTCCTGGGCCTCCCCAGGCACCCCCCAGTGATACAGACTCTGAAGAGGAGGAGGAAGAGGAGGAAGAGGAAGAAGAAGAAGAGATGGCAACAGTGGTAGGGGGTGAAGCCCCAGTCCCTGTGCTGCCAACACCCCCTGAGGCTCCTAGGCCCCCTGCCACAGTGCACCCTGAAGGAGTCCCTCCTGCTGACAGTGAAAGCAAGGAGGTGGGCAGCACTGAAACAAGCCAAGATGGAGATGCCAGCTCCAGTGAAGGCGAGATGCGGGTCATGGACGAGGACATCATGGTAGAATCAGGTGATGACTCATGGGATCTGATCACATGTTACTGTCGAAAGCCCTTTGCAGGGCGGCCCATGATTGAGTGCAGCCTGTGTGGGACGTGGATCCACCTCTCCTGTGCTAAGATTAAGAAGACCAACGTCCCCGACTTCTTTTATTGCCAGAAATGCAAGGAACTGAGGCCAGAGGCCCGGCGGTTAGGGGGGCCTCCCAAATCTGGAGAGCCCTGA
Amino sequence
MLEAMAEPSPEDPPPTLKPETQPPEKRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPTQPGPPRSTFSRLQAPDSATLLEKMKLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRKLGPGAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPQAPPSDTDSEEEEEEEEEEEEEEMATVVGGEAPVPVLPTPPEAPRPPATVHPEGVPPADSESKEVGSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP*