ENST00000546760.5 C17orf49
Information
- Transcript ID
- ENST00000546760.5
- Genome
- hg19
- Position
- chr17:6,918,072-6,920,825
- Strand
- +
- CDS length
- 474
- Amino acid length
- 158
- Gene symbol
- C17orf49
- Gene type
- protein-coding
- Gene description
- chromosome 17 open reading frame 49
- Gene Entrez Gene ID
- 124944
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 6,918,072 | 6,918,197 |
| 2 | 6,918,381 | 6,918,475 |
| 3 | 6,919,093 | 6,919,194 |
| 4 | 6,919,814 | 6,920,004 |
| 5 | 6,920,576 | 6,920,825 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 6,918,177 | 6,918,197 |
| 2 | CDS | 6,918,381 | 6,918,475 |
| 3 | CDS | 6,919,093 | 6,919,194 |
| 4 | CDS | 6,919,814 | 6,920,004 |
| 5 | CDS | 6,920,576 | 6,920,640 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 7,014,753 | 7,017,506 | Link |
CDS sequence
ATGACGTCAGCGTCCACAAAGGTCGGAGAGATCTTCTCGGCGGCCGGCGCCGCCTTCACGAAGCTCGGGGAGCTGACGATGCAGCTGCATCCCGTGGCCGACTCTTCTCCTGCGGGTGCGAAGTGGACGGAGACGGAAATAGAGATGCTGAGGGCTGCTGTGAAGCGATTTGGGGACGATCTTAATCACATCAGCTGTGTCATCAAGGAACGGACAGTGGCCCAGATAAAGGCCACTGTGAAACGCAAGGTATATGAAGATTCTGGCATCCCCCTTCCAGCTGAGTCACCCAAGAAAGGGCCCAAGAAGGTGGCATCTGGTGTCTTGTCACCTCCTCCAGCTGCCCCTCCTCCCAGCAGCTCCAGTGTCCCTGAGGCCGGGGGTCCCCCCATAAAGAAACAGAAGGCTGACAGCCTGACCCTGGATTCTGGCCTTCTCATGACCTCTGCTGATCCTCCTCTCCTCTCCTGCTGA
Amino sequence
MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDDLNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADSLTLDSGLLMTSADPPLLSC*