ENST00000547302.3 RNASEK-C17orf49
Information
- Transcript ID
- ENST00000547302.3
- Genome
- hg19
- Position
- chr17:6,917,052-6,920,839
- Strand
- +
- CDS length
- 701
- Amino acid length
- 233.667
- Gene symbol
- RNASEK-C17orf49
- Gene type
- ncRNA
- Gene description
- RNASEK-C17orf49 readthrough
- Gene Entrez Gene ID
- 100529209
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 6,917,052 | 6,917,061 |
| 2 | 6,917,464 | 6,917,596 |
| 3 | 6,918,381 | 6,918,475 |
| 4 | 6,919,093 | 6,919,194 |
| 5 | 6,919,814 | 6,920,004 |
| 6 | 6,920,229 | 6,920,333 |
| 7 | 6,920,576 | 6,920,839 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 6,917,052 | 6,917,061 |
| 2 | CDS | 6,917,464 | 6,917,596 |
| 3 | CDS | 6,918,381 | 6,918,475 |
| 4 | CDS | 6,919,093 | 6,919,194 |
| 5 | CDS | 6,919,814 | 6,920,004 |
| 6 | CDS | 6,920,229 | 6,920,333 |
| 7 | CDS | 6,920,576 | 6,920,640 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 7,013,733 | 7,017,520 | Link |
CDS sequence
AAGATTTTGAGAATGGCCCCCAGAACATATACAACCTTTACGAGCAAGTCAGCTACAACTGTTTCATCGCTGCAGGCCTTTACCTCCTCCTCGGAGGCTTCTCTTTCTGCCAAGTTCGGCTCAATAAGCGCAAGGAATACATGGTCGGAGAGATCTTCTCGGCGGCCGGCGCCGCCTTCACGAAGCTCGGGGAGCTGACGATGCAGCTGCATCCCGTGGCCGACTCTTCTCCTGCGGGTGCGAAGTGGACGGAGACGGAAATAGAGATGCTGAGGGCTGCTGTGAAGCGATTTGGGGACGATCTTAATCACATCAGCTGTGTCATCAAGGAACGGACAGTGGCCCAGATAAAGGCCACTGTGAAACGCAAGGTATATGAAGATTCTGGCATCCCCCTTCCAGCTGAGTCACCCAAGAAAGGGCCCAAGAAGGTGGCATCTGGTGTCTTGTCACCTCCTCCAGCTGCCCCTCCTCCCAGCAGCTCCAGTGTCCCTGAGGCCGGGGGTCCCCCCATAAAGAAACAGAAGGCTGATGTGACACTCAGTGCTCTGAACGACTCCGATGCCAACAGTGACGTGGTGGATATTGAAGGGCTAGGAGAAACTCCTCCAGCTAAGAAACTCAACTTCGACCAGGACAGCCTGACCCTGGATTCTGGCCTTCTCATGACCTCTGCTGATCCTCCTCTCCTCTCCTGCTGA
Amino sequence
KILRMAPRTYTTFTSKSATTVSSLQAFTSSSEASLSAKFGSISARNTWSERSSRRPAPPSRSSGS*RCSCIPWPTLLLRVRSGRRRK*RC*GLL*SDLGTILITSAVSSRNGQWPR*RPL*NARYMKILASPFQLSHPRKGPRRWHLVSCHLLQLPLLPAAPVSLRPGVPP*RNRRLM*HSVL*TTPMPTVTWWILKG*EKLLQLRNSTSTRTA*PWILAFS*PLLILLSSPA