ENST00000700535.1 NUP88

Information
Transcript ID
ENST00000700535.1
Genome
hg19
Position
chr17:5,286,415-5,322,991
Strand
-
CDS length
2,139
Amino acid length
713
Gene symbol
NUP88
Gene type
protein-coding
Gene description
nucleoporin 88
Gene Entrez Gene ID
4927
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
17 5,286,415 5,286,861
16 5,286,887 5,289,589
15 5,290,028 5,290,146
14 5,290,304 5,290,430
13 5,290,706 5,290,786
12 5,290,925 5,290,990
11 5,291,099 5,291,224
10 5,292,122 5,292,280
9 5,294,881 5,294,982
8 5,298,211 5,298,301
7 5,302,872 5,302,970
6 5,307,419 5,307,566
5 5,308,377 5,308,563
4 5,312,053 5,312,229
3 5,317,329 5,317,454
2 5,319,833 5,320,002
1 5,322,674 5,322,991
CDS
Exon number Type Start Stop
16 CDS 5,289,526 5,289,589
15 CDS 5,290,028 5,290,146
14 CDS 5,290,304 5,290,430
13 CDS 5,290,706 5,290,786
12 CDS 5,290,925 5,290,990
11 CDS 5,291,099 5,291,224
10 CDS 5,292,122 5,292,280
9 CDS 5,294,881 5,294,982
8 CDS 5,298,211 5,298,301
7 CDS 5,302,872 5,302,970
6 CDS 5,307,419 5,307,566
5 CDS 5,308,377 5,308,563
4 CDS 5,312,053 5,312,229
3 CDS 5,317,329 5,317,454
2 CDS 5,319,833 5,320,002
1 CDS 5,322,674 5,322,970
Other genome
Genome Chromosome Start End Links
hg38 chr17 5,383,120 5,419,671 Link
CDS sequence
ATGGCGGCCGCCGAGGGACCGGTGGGCGACGGCGAGCTGTGGCAGACCTGGCTTCCTAACCACGTCGTGTTCTTGCGGCTCCGGGAGGGACTGAAAAACCAGAGTCCAACCGAAGCTGAGAAACCAGCTTCTTCGTCGTTGCCTTCGTCGCCGCCGCCGCAGTTGCTGACGAGAAACGTGGTCTTTGGCCTCGGCGGAGAGCTTTTCCTGTGGGACGGAGAAGACAGCTCCTTCTTAGTCGTTCGCCTTCGGGGCCCCAGCGGCGGCGGCGAAGAGCCCGCCCTGTCCCAGTACCAGAGATTGCTTTGCATAAATCCACCCCTGTTTGAAATCTATCAAGTCTTGTTAAGCCCAACACAACATCATGTAGCACTTATAGGAATAAAAGGACTTATGGTATTAGAATTACCTAAAAGATGGGGGAAGAATTCTGAATTTGAAGGTGGAAAATCAACAGTGAATTGTAGTACCACTCCAGTTGCGGAGAGATTTTTCACCAGTTCCACCTCTCTGACTCTAAAGCATGCTGCATGGTATCCAAGTGAAATCCTGGATCCCCACGTAGTGCTGTTAACATCAGACAACGTAATCAGAAGGGCGTATACCGCATCTCTAGGAGAGACAGCAGTTGCATTTGACTTTGGGCCATTGGCAGCAGTCCCAAAGACTCTATTTGGACAAAACGGCAAAGATGAAGTAGTGGCATACCCACTGTACATCTTATATGAAAATGGAGAGACTTTCCTGACATACATCAGTCTGTTACACAGCCCTGGAAATATTGGAAAGCTGTTGGGTCCATTGCCCATGCATCCTGCGGCTGAAGATAACTATGGTTATGATGCGTGTGCTGTACTCTGCTTACCCTGTGTCCCCAATATCTTAGTGATCGCTACTGAATCAGGAATGCTGTATCACTGTGTCGTGCTAGAAGGGGAAGAAGAAGATGACCACACGTCAGAAAAGTCCTGGGATTCCAGGATTGACCTCATTCCTTCTCTGTATGTGTTTGAATGTGTTGAGTTGGAGCTTGCTTTGAAACTGGCATCTGGAGAGGATGACCCTTTTGATTCTGACTTTTCTTGTCCAGTCAAACTTCATAGAGATCCCAAGTGTCCTTCAAGATATCACTGTACTCATGAAGCTGGTGTACATAGTGTTGGGCTAACTTGGATTCATAAACTTCACAAATTTCTTGGATCAGATGAAGAAGATAAGGATAGTTTACAGGAACTCTCTACAGAACAGAAATGCTTTGTTGAACACATCCTTTGTACGAAGCCATTGCCCTGCAGGCAGCCAGCTCCAATTCGAGGATTTTGGATTGTACCTGACATTCTGGGACCCACGATGATCTGCATCACCAGTACCTATGAATGCCTCATATGGCCGTTATTAAGTACAGTCCATCCAGCGTCTCCTCCCCTGCTTTGTACTCGAGAAGATGTTGAAGTGGCAGAGTCTCCCCTCCGTGTTCTGGCTGAAACCCCAGATTCCTTTGAAAAGCATATTAGAAGCATTTTGCAACGTAGTGTTGCCAATCCAGCATTTTTGAAAGCTTCTGAAAAGGACATAGCCCCTCCTCCTGAAGAATGCCTTCAGCTCCTCAGCAGAGCCACCCAGGTGTTCAGAGAGCAGTACATTCTCAAACAGGACTTGGCAAAGGAGGAGATTCAGCGGAGGGTCAAATTATTATGTGACCAAAAAAAGAAACAACTAGAAGATCTCAGTTATTGTCGAGAAGAGAGGAAAAGTCTGCGGGAAATGGCTGAGCGTTTAGCTGACAAATATGAGGAAGCTAAAGAAAAACAAGAGGATATCATGAACAGGATGAAAAAACTACTTCACAGTTTTCACTCTGAGCTCCCAGTTCTCTCTGATAGTGAGCGAGACATGAAGAAAGAATTACAGCTGATACCTGATCAACTTCGACATTTGGGCAATGCCATCAAACAGGTTACTATGAAAAAGGATTATCAACAGCAAAAGATGGAGAAGGTGTTGAGTCTTCCAAAACCCACCATTATTCTCAGTGCCTACCAGCGAAAGTGCATTCAGTCCATCCTGAAAGAGGAGGGTGAACATATAAGGGAAATGGTGAAGCAAATCAATGATATCCGCAATCATGTAAACTTCTGA
Amino sequence
MAAAEGPVGDGELWQTWLPNHVVFLRLREGLKNQSPTEAEKPASSSLPSSPPPQLLTRNVVFGLGGELFLWDGEDSSFLVVRLRGPSGGGEEPALSQYQRLLCINPPLFEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPVAERFFTSSTSLTLKHAAWYPSEILDPHVVLLTSDNVIRRAYTASLGETAVAFDFGPLAAVPKTLFGQNGKDEVVAYPLYILYENGETFLTYISLLHSPGNIGKLLGPLPMHPAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEGEEEDDHTSEKSWDSRIDLIPSLYVFECVELELALKLASGEDDPFDSDFSCPVKLHRDPKCPSRYHCTHEAGVHSVGLTWIHKLHKFLGSDEEDKDSLQELSTEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGPTMICITSTYECLIWPLLSTVHPASPPLLCTREDVEVAESPLRVLAETPDSFEKHIRSILQRSVANPAFLKASEKDIAPPPEECLQLLSRATQVFREQYILKQDLAKEEIQRRVKLLCDQKKKQLEDLSYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKLLHSFHSELPVLSDSERDMKKELQLIPDQLRHLGNAIKQVTMKKDYQQQKMEKVLSLPKPTIILSAYQRKCIQSILKEEGEHIREMVKQINDIRNHVNF*