ENST00000576153.5 CXCL16

Information
Transcript ID
ENST00000576153.5
Genome
hg19
Position
chr17:4,636,870-4,639,675
Strand
-
CDS length
348
Amino acid length
116
Gene symbol
CXCL16
Gene type
protein-coding
Gene description
C-X-C motif chemokine ligand 16
Gene Entrez Gene ID
58191
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 4,636,870 4,637,774
3 4,637,878 4,637,947
2 4,638,387 4,638,803
1 4,639,584 4,639,675
CDS
Exon number Type Start Stop
3 CDS 4,637,901 4,637,947
2 CDS 4,638,387 4,638,687
Other genome
Genome Chromosome Start End Links
hg38 chr17 4,733,575 4,736,380 Link
CDS sequence
ATGCTCCTGTCCACCTTGCAGTCCACTCAGCGCCCCACCCTCCCAGTAGGATCACTGTCCTCGGACAAAGAGCTCACTCGTCCCAATGAAACCACCATTCACACTGCGGGCCACAGTCTGGCAGCTGGGCCTGAGGCTGGGGAGAACCAGAAGCAGCCGGAAAAAAATGCTGGTCCCACAGCCAGGACATCAGCCACAGTGCCAGTCCTGTGCCTCCTGGCCATCATCTTCATCCTCACCGCAGCCCTTTCCTATGTGCTGTGCAAGAGGAGGAGGGGGCAGTCACCGCAGTCCTCTCCAGATCTGCCGGTTCATTATATACCTGTGGCACCTGACTCTAATACCTGA
Amino sequence
MLLSTLQSTQRPTLPVGSLSSDKELTRPNETTIHTAGHSLAAGPEAGENQKQPEKNAGPTARTSATVPVLCLLAIIFILTAALSYVLCKRRRGQSPQSSPDLPVHYIPVAPDSNT*