ENST00000329078.8 SPNS2

Information
Transcript ID
ENST00000329078.8
Genome
hg19
Position
chr17:4,402,176-4,442,330
Strand
+
CDS length
1,650
Amino acid length
550
Gene symbol
SPNS2
Gene type
protein-coding
Gene description
SPNS lysolipid transporter 2, sphingosine-1-phosphate
Gene Entrez Gene ID
124976
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 4,402,176 4,402,712
2 4,416,542 4,416,607
3 4,428,352 4,428,488
4 4,433,927 4,434,078
5 4,434,348 4,434,414
6 4,435,837 4,435,979
7 4,436,272 4,436,424
8 4,436,538 4,436,727
9 4,437,083 4,437,148
10 4,439,371 4,439,469
11 4,439,558 4,439,721
12 4,440,195 4,440,241
13 4,440,748 4,442,330
CDS
Exon number Type Start Stop
1 CDS 4,402,343 4,402,712
2 CDS 4,416,542 4,416,607
3 CDS 4,428,352 4,428,488
4 CDS 4,433,927 4,434,078
5 CDS 4,434,348 4,434,414
6 CDS 4,435,837 4,435,979
7 CDS 4,436,272 4,436,424
8 CDS 4,436,538 4,436,727
9 CDS 4,437,083 4,437,148
10 CDS 4,439,371 4,439,469
11 CDS 4,439,558 4,439,721
12 CDS 4,440,195 4,440,237
Other genome
Genome Chromosome Start End Links
hg38 chr17 4,498,881 4,539,035 Link
CDS sequence
ATGATGTGCCTGGAATGCGCCTCGGCGGCGGCGGGCGGCGCGGAGGAGGAGGAGGCGGACGCGGAGCGGCGGCGCCGGCGCCGGGGGGCGCAGCGAGGGGCTGGCGGTAGCGGTTGCTGCGGGGCGCGGGGCGCGGGCGGCGCTGGAGTCTCGGCCGCGGGCGATGAGGTGCAGACGCTGTCGGGCAGCGTAAGGCGGGCCCCGACCGGACCCCCCGGCACCCCCGGCACCCCCGGCTGCGCAGCTACTGCAAAGGGCCCCGGCGCTCAGCAGCCCAAACCGGCCAGCTTGGGCCGCGGGCGGGGGGCAGCCGCCGCCATCCTCAGCTTGGGCAACGTGCTCAACTACCTGGACAGGTACACCGTGGCAGGCGTCCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGAGGCGCCGGCCTGCTGCAGTCAGTGTTCATCTGTAGCTTCATGGTGGCTGCCCCCATCTTCGGCTACCTGGGCGACCGCTTCAACAGGAAGGTGATTCTCAGCTGCGGCATTTTCTTCTGGTCGGCCGTCACCTTCTCCAGCTCCTTCATTCCCCAGCAGTACTTCTGGCTGCTGGTCCTGTCCCGGGGGCTGGTGGGCATCGGGGAGGCCAGCTACTCCACCATCGCCCCCACTATCATTGGCGACCTCTTCACCAAGAACACGCGTACGCTCATGCTGTCCGTCTTCTACTTCGCCATCCCACTGGGCAGTGGCCTGGGCTACATTACTGGCTCCAGCGTGAAGCAGGCAGCCGGAGACTGGCACTGGGCATTGCGGGTGTCCCCTGTCCTGGGCATGATCACAGGAACACTCATCCTCATTCTGGTCCCAGCCACTAAAAGGGGTCATGCCGACCAGCTCGGGGACCAGCTCAAGGCCCGGACCTCATGGCTCCGAGATATGAAGGCCCTGATTCGAAACCGCAGCTACGTCTTCTCCTCCCTGGCCACGTCGGCTGTCTCCTTCGCCACGGGGGCCCTGGGCATGTGGATCCCGCTCTACCTGCACCGCGCCCAAGTTGTGCAGAAGACAGCAGAGACGTGCAACAGCCCGCCCTGTGGGGCCAAGGACAGCCTCATCTTTGGGGCCATCACCTGCTTTACGGGATTTCTGGGCGTGGTCACGGGGGCAGGAGCCACGCGCTGGTGCCGCCTGAAGACCCAGCGGGCCGACCCACTGGTGTGTGCCGTGGGCATGCTGGGCTCTGCCATCTTCATCTGCCTGATCTTCGTGGCTGCCAAGAGCAGCATCGTAGGAGCCTATATCTGTATCTTCGTCGGGGAGACGCTGCTGTTTTCTAACTGGGCCATCACTGCAGACATCCTCATGTACGTGGTCATCCCCACGCGGCGCGCCACTGCCGTGGCCTTGCAGAGCTTCACCTCCCACCTGCTGGGGGACGCCGGGAGCCCCTACCTCATTGGCTTTATCTCAGACCTGATCCGCCAGAGCACTAAGGACTCCCCGCTCTGGGAGTTCCTGAGCCTGGGCTACGCGCTCATGCTCTGCCCTTTCGTCGTGGTCCTGGGCGGCATGTTCTTCCTCGCCACTGCGCTCTTCTTCGTCAGCGACCGCGCCAGGGCTGAGCAGCAGGTGAACCAGCTGGCGATGCCGCCCGCATCTGTGAAAGTCTGA
Amino sequence
MMCLECASAAAGGAEEEEADAERRRRRRGAQRGAGGSGCCGARGAGGAGVSAAGDEVQTLSGSVRRAPTGPPGTPGTPGCAATAKGPGAQQPKPASLGRGRGAAAAILSLGNVLNYLDRYTVAGVLLDIQQHFGVKDRGAGLLQSVFICSFMVAAPIFGYLGDRFNRKVILSCGIFFWSAVTFSSSFIPQQYFWLLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQAAGDWHWALRVSPVLGMITGTLILILVPATKRGHADQLGDQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGALGMWIPLYLHRAQVVQKTAETCNSPPCGAKDSLIFGAITCFTGFLGVVTGAGATRWCRLKTQRADPLVCAVGMLGSAIFICLIFVAAKSSIVGAYICIFVGETLLFSNWAITADILMYVVIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKDSPLWEFLSLGYALMLCPFVVVLGGMFFLATALFFVSDRARAEQQVNQLAMPPASVKV*