ENST00000355530.7 SPNS3

Information
Transcript ID
ENST00000355530.7
Genome
hg19
Position
chr17:4,337,235-4,391,499
Strand
+
CDS length
1,539
Amino acid length
513
Gene symbol
SPNS3
Gene type
protein-coding
Gene description
SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative)
Gene Entrez Gene ID
201305
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 4,337,235 4,337,461
2 4,342,953 4,343,018
3 4,348,327 4,348,463
4 4,349,343 4,349,494
5 4,350,191 4,350,257
6 4,351,450 4,351,598
7 4,352,530 4,352,682
8 4,356,311 4,356,500
9 4,381,867 4,381,932
10 4,389,523 4,389,621
11 4,389,707 4,389,878
12 4,391,101 4,391,499
CDS
Exon number Type Start Stop
1 CDS 4,337,263 4,337,461
2 CDS 4,342,953 4,343,018
3 CDS 4,348,327 4,348,463
4 CDS 4,349,343 4,349,494
5 CDS 4,350,191 4,350,257
6 CDS 4,351,450 4,351,598
7 CDS 4,352,530 4,352,682
8 CDS 4,356,311 4,356,500
9 CDS 4,381,867 4,381,932
10 CDS 4,389,523 4,389,621
11 CDS 4,389,707 4,389,878
12 CDS 4,391,101 4,391,189
Other genome
Genome Chromosome Start End Links
hg38 chr17 4,433,940 4,488,204 Link
CDS sequence
ATGGCTGGGGGGATGTCAGCGGAGTGCCCTGAGCCTGGGCCAGGAGGTCTGCAGGGCCAGTCCCCAGGGCCAGGCAGGCAGTGTCCCCCTCCCATCACGCCCACCTCCTGGAGCCTGCCCCCGTGGAGGGCCTACGTGGCTGCCGCCGTCCTCTGCTACATCAACCTCCTGAATTACATGAACTGGTTCATCATTGCAGGAGTGCTGCTGGATATACAGGAGGTTTTCCAGATCAGTGACAACCATGCTGGTTTGCTTCAGACTGTCTTCGTTAGCTGCCTGCTGCTGTCTGCACCTGTGTTTGGCTACCTGGGCGACCGACATAGCCGCAAGGCTACCATGAGCTTCGGTATCTTGCTGTGGTCAGGAGCTGGCCTCTCTAGCTCCTTCATCTCCCCCCGGTATTCTTGGCTCTTCTTCCTGTCCCGGGGCATCGTGGGCACTGGCTCGGCCAGCTACTCCACCATCGCGCCCACCGTCCTGGGCGACCTCTTCGTGAGGGACCAGCGCACCCGCGTGCTGGCTGTCTTCTACATCTTTATCCCCGTTGGAAGTGGTCTGGGCTACGTGCTGGGGTCGGCTGTGACGATGCTGACTGGGAACTGGCGCTGGGCCCTCCGAGTCATGCCCTGCCTGGAGGCCGTGGCCTTGATCCTGCTTATCCTGCTGGTTCCAGACCCACCCCGGGGAGCTGCCGAGACACAGGGGGAGGGGGCCGTGGGAGGCTTCAGGAGCAGCTGGTGTGAGGACGTCAGATACCTGGGGAAAAACTGGAGTTTCGTGTGGTCGACCCTCGGAGTGACCGCCATGGCCTTTGTGACTGGAGCCCTGGGGTTCTGGGCCCCCAAGTTTCTGCTCGAGGCACGCGTGGTTCACGGGCTGCAGCCTCCCTGCTTCCAGGAGCCGTGCAGCAACCCCGACAGCCTGATTTTTGGGGCACTGACCATCATGACCGGCGTCATTGGGGTCATCTTGGGGGCAGAAGCTGCGAGGAGGTACAAGAAAGTCATTCCAGGAGCTGAGCCCCTCATCTGCGCCTCCAGCCTGCTTGCCACAGCCCCCTGCCTCTACCTGGCTCTCGTCCTGGCCCCGACCACCCTGCTGGCCTCCTATGTGTTCCTGGGCCTTGGGGAGCTGCTTCTGTCCTGCAACTGGGCAGTGGTTGCCGACATCCTGCTGTCTGTGGTGGTGCCCAGATGCCGGGGGACGGCAGAGGCACTTCAGATCACGGTGGGCCACATCCTGGGAGACGCTGGCAGCCCCTATCTCACAGGACTTATCTCTAGTGTCCTGCGGGCCAGGCGCCCTGACTCCTATCTGCAGCGCTTCCGCAGCCTGCAGCAGAGCTTCCTGTGCTGCGCCTTTGTCATCGCCCTGGGGGGCGGCTGCTTCCTGCTGACTGCGCTGTACCTGGAGAGAGACGAGACCCGGGCCTGGCAGCCTGTCACAGGGACCCCAGACAGCAATGATGTGGACAGCAACGACCTGGAGAGACAAGGCCTACTTTCGGGCGCTGGCGCCTCTACAGAGGAGCCCTGA
Amino sequence
MAGGMSAECPEPGPGGLQGQSPGPGRQCPPPITPTSWSLPPWRAYVAAAVLCYINLLNYMNWFIIAGVLLDIQEVFQISDNHAGLLQTVFVSCLLLSAPVFGYLGDRHSRKATMSFGILLWSGAGLSSSFISPRYSWLFFLSRGIVGTGSASYSTIAPTVLGDLFVRDQRTRVLAVFYIFIPVGSGLGYVLGSAVTMLTGNWRWALRVMPCLEAVALILLILLVPDPPRGAAETQGEGAVGGFRSSWCEDVRYLGKNWSFVWSTLGVTAMAFVTGALGFWAPKFLLEARVVHGLQPPCFQEPCSNPDSLIFGALTIMTGVIGVILGAEAARRYKKVIPGAEPLICASSLLATAPCLYLALVLAPTTLLASYVFLGLGELLLSCNWAVVADILLSVVVPRCRGTAEALQITVGHILGDAGSPYLTGLISSVLRARRPDSYLQRFRSLQQSFLCCAFVIALGGGCFLLTALYLERDETRAWQPVTGTPDSNDVDSNDLERQGLLSGAGASTEEP*