ENST00000417656.6 SKA1

Information
Transcript ID
ENST00000417656.6
Genome
hg38
Position
chr18:50,375,043-50,392,549
Strand
+
CDS length
630
Amino acid length
210
Gene symbol
SKA1
Gene type
protein-coding
Gene description
spindle and kinetochore associated complex subunit 1
Gene Entrez Gene ID
220134
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 50,375,043 50,375,194
2 50,375,820 50,375,918
3 50,380,126 50,380,250
4 50,382,129 50,382,226
5 50,391,124 50,391,293
6 50,392,099 50,392,549
CDS
Exon number Type Start Stop
2 CDS 50,375,831 50,375,918
3 CDS 50,380,126 50,380,250
4 CDS 50,382,129 50,382,226
5 CDS 50,391,124 50,391,293
6 CDS 50,392,099 50,392,247
Other genome
Genome Chromosome Start End Links
hg19 chr18 47,901,413 47,918,919 Link
CDS sequence
ATGGCCTCGTCAGATCTGGAACAATTATGCTCTCATGTTAATGAAAAGATTGGCAATATTAAGAAAACCTTATCATTAAGAAACTGTGGCCAGGAACCTACCTTGAAAACTGTATTAAATAAAATAGGAGATGAGATCATTGTAATAAATGAACTTCTAAATAAATTGGAATTGGAAATTCAGTATCAAGAACAAACCAACAATTCACTCAAGGAACTCTGTGAATCTCTTGAAGAAGATTACAAAGACATAGAACATCTTAAAGAAAACGTTCCTTCCCATTTGCCTCAAGTAACAGTAACCCAGAGCTGGTACATGAAATCCCGCTTAACCTATAATCAAATTAATGATGTTATTAAAGAAATCAACAAGGCAGTAATTAGTAAATATAAAATCCTACATCAGCCAAAAAAGTCTATGAATTCTGTGACCAGAAATCTCTATCACAGATTTATTGATGAAGAAACGAAGGATACCAAAGGTCGTTATTTTATAGTGGAAGCTGACATAAAGGAGTTCACAACTTTGAAAGCTGACAAGAAGTTTCACGTGTTACTGAATATTTTACGACACTGCCGGAGGCTATCAGAGGTCCGAGGGGGAGGACTTACTCGTTATGTTATAACCTGA
Amino sequence
MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSWYMKSRLTYNQINDVIKEINKAVISKYKILHQPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRRLSEVRGGGLTRYVIT*