ENST00000268981.9 SPATA22
Information
- Transcript ID
- ENST00000268981.9
- Genome
- hg19
- Position
- chr17:3,343,537-3,375,033
- Strand
- -
- CDS length
- 810
- Amino acid length
- 270
- Gene symbol
- SPATA22
- Gene type
- protein-coding
- Gene description
- spermatogenesis associated 22
- Gene Entrez Gene ID
- 84690
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 3,343,537 | 3,343,632 |
| 7 | 3,349,766 | 3,349,895 |
| 6 | 3,352,101 | 3,352,443 |
| 5 | 3,365,777 | 3,365,872 |
| 4 | 3,366,001 | 3,366,061 |
| 3 | 3,370,720 | 3,370,848 |
| 2 | 3,372,577 | 3,372,692 |
| 1 | 3,374,725 | 3,375,033 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 3,343,625 | 3,343,632 |
| 7 | CDS | 3,349,766 | 3,349,895 |
| 6 | CDS | 3,352,101 | 3,352,443 |
| 5 | CDS | 3,365,777 | 3,365,872 |
| 4 | CDS | 3,366,001 | 3,366,061 |
| 3 | CDS | 3,370,720 | 3,370,848 |
| 2 | CDS | 3,372,577 | 3,372,619 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 3,440,243 | 3,471,739 | Link |
CDS sequence
ATGAAGCGAAGCCTAAATGAAAATTCAGCTCGAAGTACAGCAGGCTGTTTGCCTGTTCCGTTGTTCAATCAGAAAAAGAGGAACAGACAGCCATTAACTTCTAATCCACTTAAAGATGATTCAGGTATCAGTACCCCTTCTGACAATTATGATTTTCCTCCTCTACCTACAGATTGGGCCTGGGAAGCTGTGAATCCAGAGTTGGCTCCTGTAATGAAAACAGTGGACACCGGGCAAATACCACATTCAGTTTCTCGTCCTCTGAGAAGTCAAGATTCTGTCTTTAACTCTATTCAATCAAATACTGGAAGAAGCCAGGGTGGTTGGAGCTACAGAGATGGTAACAAAAATACCAGCTTGAAAACTTGGAATAAAAATGATTTTAAGCCTCAATGTAAACGAACAAACTTAGTGGCAAATGATGGAAAAAATTCTTGTCCAGTGAGTTCGGGAGCTCAACAACAAAAACAATTAAGAATACCTGAACCTCCTAACTTATCTCGCAACAAAGAAACCGAGCTACTCAGACAAACACATTCATCAAAAATATCTGGCTGCACAATGAGAGGGCTAGACAAAAACAGTGCACTACAGACACTTAAGCCCAATTTTCAACAAAATCAATATAAGAAACAAATGTTGGATGATATTCCAGAAGACAACACCCTGAAGGAAACCTCATTGTATCAGTTACAGTTTAAGGAAAAAGCTAGTTCTTTAAGAATTATTTCTGCAGTTATTGAAAGCATGAAGTATTGGCGTGAACATGCACAGAAAACTGTACTTCTTTTTGAAGTATTAGGATCGTGA
Amino sequence
MKRSLNENSARSTAGCLPVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWAWEAVNPELAPVMKTVDTGQIPHSVSRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHSSKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSLRIISAVIESMKYWREHAQKTVLLFEVLGS*