ENST00000541913.5 SPATA22
Information
- Transcript ID
- ENST00000541913.5
- Genome
- hg19
- Position
- chr17:3,343,316-3,417,146
- Strand
- -
- CDS length
- 1,044
- Amino acid length
- 348
- Gene symbol
- SPATA22
- Gene type
- protein-coding
- Gene description
- spermatogenesis associated 22
- Gene Entrez Gene ID
- 84690
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 3,343,316 | 3,343,632 |
| 8 | 3,346,468 | 3,346,565 |
| 7 | 3,349,766 | 3,349,895 |
| 6 | 3,352,101 | 3,352,443 |
| 5 | 3,365,777 | 3,365,872 |
| 4 | 3,366,001 | 3,366,061 |
| 3 | 3,370,768 | 3,370,848 |
| 2 | 3,372,577 | 3,372,692 |
| 1 | 3,416,706 | 3,417,146 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 9 | CDS | 3,343,441 | 3,343,632 |
| 8 | CDS | 3,346,468 | 3,346,565 |
| 7 | CDS | 3,349,766 | 3,349,895 |
| 6 | CDS | 3,352,101 | 3,352,443 |
| 5 | CDS | 3,365,777 | 3,365,872 |
| 4 | CDS | 3,366,001 | 3,366,061 |
| 3 | CDS | 3,370,768 | 3,370,848 |
| 2 | CDS | 3,372,577 | 3,372,619 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 3,440,022 | 3,513,852 | Link |
CDS sequence
ATGAAGCGAAGCCTAAATGAAAATTCAGCTCGAAGTACAGCAGGCTGTTTGCCTGTTCCGTTGTTCAATCAGAAAAAGAGGAACAGACAGCCATTAACTTCTAATCCACTTAAAGATGATTCAGATTGGGCCTGGGAAGCTGTGAATCCAGAGTTGGCTCCTGTAATGAAAACAGTGGACACCGGGCAAATACCACATTCAGTTTCTCGTCCTCTGAGAAGTCAAGATTCTGTCTTTAACTCTATTCAATCAAATACTGGAAGAAGCCAGGGTGGTTGGAGCTACAGAGATGGTAACAAAAATACCAGCTTGAAAACTTGGAATAAAAATGATTTTAAGCCTCAATGTAAACGAACAAACTTAGTGGCAAATGATGGAAAAAATTCTTGTCCAGTGAGTTCGGGAGCTCAACAACAAAAACAATTAAGAATACCTGAACCTCCTAACTTATCTCGCAACAAAGAAACCGAGCTACTCAGACAAACACATTCATCAAAAATATCTGGCTGCACAATGAGAGGGCTAGACAAAAACAGTGCACTACAGACACTTAAGCCCAATTTTCAACAAAATCAATATAAGAAACAAATGTTGGATGATATTCCAGAAGACAACACCCTGAAGGAAACCTCATTGTATCAGTTACAGTTTAAGGAAAAAGCTAGTTCTTTAAGAATTATTTCTGCAGTTATTGAAAGCATGAAGTATTGGCGTGAACATGCACAGAAAACTGTACTTCTTTTTGAAGTATTAGCTGTTCTTGATTCAGCTGTTACACCTGGCCCATATTATTCGAAGACTTTTCTTATGAGGGATGGGAAAAATACTCTGCCTTGTGTCTTTTATGAAATCGATCGTGAACTTCCGAGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGTGTTTCTGTCAGACCGGCGTCTGTTTCTGAACAAAAAACTTTCCAGGCATTTGTCAAAATTGCAGATGTTGAGATGCAGTATTATATTAATGTGATGAATGAAACTTAA
Amino sequence
MKRSLNENSARSTAGCLPVPLFNQKKRNRQPLTSNPLKDDSDWAWEAVNPELAPVMKTVDTGQIPHSVSRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHSSKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSLRIISAVIESMKYWREHAQKTVLLFEVLAVLDSAVTPGPYYSKTFLMRDGKNTLPCVFYEIDRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQAFVKIADVEMQYYINVMNET*