ENST00000313486.12 PITPNA
Information
- Transcript ID
- ENST00000313486.12
- Genome
- hg19
- Position
- chr17:1,421,012-1,466,086
- Strand
- -
- CDS length
- 813
- Amino acid length
- 271
- Gene symbol
- PITPNA
- Gene type
- protein-coding
- Gene description
- phosphatidylinositol transfer protein alpha
- Gene Entrez Gene ID
- 5306
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 12 | 1,421,012 | 1,423,832 |
| 11 | 1,424,873 | 1,424,939 |
| 10 | 1,437,393 | 1,437,515 |
| 9 | 1,438,476 | 1,438,586 |
| 8 | 1,438,735 | 1,438,812 |
| 7 | 1,442,163 | 1,442,246 |
| 6 | 1,444,860 | 1,444,934 |
| 5 | 1,446,314 | 1,446,321 |
| 4 | 1,451,590 | 1,451,681 |
| 3 | 1,456,298 | 1,456,443 |
| 2 | 1,461,823 | 1,461,853 |
| 1 | 1,465,835 | 1,466,086 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 11 | CDS | 1,424,895 | 1,424,939 |
| 10 | CDS | 1,437,393 | 1,437,515 |
| 9 | CDS | 1,438,476 | 1,438,586 |
| 8 | CDS | 1,438,735 | 1,438,812 |
| 7 | CDS | 1,442,163 | 1,442,246 |
| 6 | CDS | 1,444,860 | 1,444,934 |
| 5 | CDS | 1,446,314 | 1,446,321 |
| 4 | CDS | 1,451,590 | 1,451,681 |
| 3 | CDS | 1,456,298 | 1,456,443 |
| 2 | CDS | 1,461,823 | 1,461,853 |
| 1 | CDS | 1,465,835 | 1,465,854 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 1,517,718 | 1,562,792 | Link |
CDS sequence
ATGGTGCTGCTCAAGGAGTATCGAGTAATCCTGCCTGTGTCTGTAGATGAGTATCAAGTGGGGCAGCTGTATTCTGTGGCTGAGGCCAGTAAAAATGAAACGGGTGGTGGCGAAGGCGTGGAGGTCCTGGTGAATGAGCCCTACGAGAAGGACGGTGAGAAAGGCCAGTACACACACAAGATCTACCACCTGCAGAGCAAAGTACCCACGTTTGTTCGAATGCTGGCCCCAGAGGGAGCCCTGAATATACACGAGAAAGCCTGGAATGCTTACCCCTACTGCAGAACCGTTATTACAAATGAGTACATGAAAGAAGACTTTCTGATTAAAATTGAAACCTGGCACAAACCAGATCTTGGCACGCAGGAGAATGTGCATAAGCTGGAGCCTGAGGCGTGGAAACACGTGGAAGCCGTATATATAGACATTGCAGATCGAAGCCAAGTGCTCAGCAAGGATTACAAGGCAGAGGAAGACCCAGCAAAATTTAAATCTATCAAAACAGGCCGAGGACCCTTGGGCCCCAATTGGAAGCAAGAGCTTGTAAACCAGAAGGACTGCCCATATATGTGTGCATACAAACTGGTGACCGTCAAGTTCAAGTGGTGGGGCCTGCAGAACAAAGTGGAGAACTTCATCCATAAGCAAGAGAGGCGTCTGTTTACAAACTTCCACAGGCAGCTGTTCTGTTGGCTCGATAAGTGGGTTGACCTGACCATGGACGACATTCGAAGGATGGAAGAAGAGACGAAGAGACAGCTGGATGAAATGAGACAAAAGGACCCAGTGAAAGGAATGACAGCAGATGACTAA
Amino sequence
MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDEMRQKDPVKGMTADD*