ENST00000449207.8 PRDM7

Information
Transcript ID
ENST00000449207.8
Genome
hg19
Position
chr16:90,122,974-90,143,739
Strand
-
CDS length
1,479
Amino acid length
493
Gene symbol
PRDM7
Gene type
protein-coding
Gene description
PR/SET domain 7
Gene Entrez Gene ID
11105
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 90,122,974 90,124,942
10 90,126,749 90,127,031
9 90,127,860 90,127,927
8 90,128,329 90,128,600
7 90,128,809 90,128,910
6 90,130,020 90,130,176
5 90,133,269 90,133,318
4 90,141,324 90,141,431
3 90,141,759 90,141,882
2 90,142,250 90,142,403
1 90,143,634 90,143,739
CDS
Exon number Type Start Stop
11 CDS 90,124,697 90,124,942
10 CDS 90,126,749 90,127,031
9 CDS 90,127,860 90,127,927
8 CDS 90,128,329 90,128,600
7 CDS 90,128,809 90,128,910
6 CDS 90,130,020 90,130,176
5 CDS 90,133,269 90,133,318
4 CDS 90,141,324 90,141,431
3 CDS 90,141,759 90,141,882
2 CDS 90,142,250 90,142,318
Other genome
Genome Chromosome Start End Links
hg38 chr16 90,056,566 90,077,331 Link
CDS sequence
ATGAGCCCTGAAAGGTCCCAAGAGGAGAGCCCAGAAGGAGACACAGAGAGAACAGAGCGGAAGCCCATGGTCAAAGATGCCTTCAAAGACATTTCCATATACTTCACCAAGGAAGAATGGGCAGAAATGGGAGACTGGGAGAAAACTCGCTATAGGAATGTGAAAATGAACTATAATGCACTGATTACTGTAGGTCTCAGAGCCACTCGACCAGCTTTCATGTGTCACCGAAGGCAGGCCATCAAACTCCAGGTGGATGACACAGAAGATTCCGATGAAGAATGGACACCTAGGCAGCAAGTCAAACCTCCTTGGATGGCCTTCAGAGGAGAACAGAGTAAACACCAGAAGGGAATGCCCAAGGCGTCATTCAATAATGAATCTAGTTTGAGAGAATTGTCAGGAACGCCAAATTTACTGAATACAAGTGACTCAGAGCAGGCTCAGAAACCAGTGTCCCCTCCTGGAGAAGCAAGTACCTCTGGACAGCACTCTAGACTAAAACTGGAACTCAGGAGGAAGGAGACTGAAGGAAAGATGTATAGCCTGCGAGAAAGAAAGGGTCATGCATACAAAGAGATCAGCGAGCCACAGGATGATGACTACCTCTATTGTGAGATGTGTCAGAACTTCTTCATTGACAGCTGTGCTGCTCATGGGCCCCCTACATTTGTAAAGGACAGTGCAGTGGACAAGGGGCATCCCAACCGTTCAGCCCTCAGTCTGCCCCCGGGGCTGAGAATTGGGCCATCAGGCATCCCTCAGGCTGGGCTTGGAGTATGGAACGAGGCATCTGATCTGCCACTGGGTCTGCACTTTGGCCCCTATGAGGGCCGAATTACAGAAGACGAAGAGGCAGCCAACAGTGGATATTCCTGGCTAATCACCAAGGGGAGAAACTGCTATGAGTATGTGGATGGAAAAGATAAATCCTCGGCCAACTGGATGAGGTATGTGAACTGTGCCCGGGATGATGAAGAGCAGAACCTGGTGGCCTTCCAGTACCACAGGCAGATCTTCTATAGAACCTGCCGAGTCATTAGGCCAGGCTGTGAACTGCTGGTCTGGTCTGGGGATGAGTATGGCCAGGAACTGGGCATCAGATCTTCTATAGAACCTGCCGAGTCATTAGGCCAGGCTGTGAACTGCTGGTCTGGTATGGGGATGAGTATGGCCAGGAACTGGGCATCAAGTGGGGCAGCAAGTGGAAGAAAGAGCTCATGGCAGGGAGAGAACCAAAGCCAGAGATCCATCCATGTCCCTCATGCTGTCTGGCCTTTTCAAGTCAAAAATTTCTCAGTCAACATGTGGAACGCAATCACTCCTCTCAGAACTTCCCAGGACCATCTGCAAGAAAACTTCTCCAACCAGAGAATCCCTGCCCAGGGGATCAGAATCAGGAGCGGCAATATTCTGATCCACGCTGCTGTAATGACAAAACCAAAGGTCAAGAGATCAAAGAAAGGTCCAAACTCTTGA
Amino sequence
MSPERSQEESPEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMPKASFNNESSLRELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKGHAYKEISEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANSGYSWLITKGRNCYEYVDGKDKSSANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWSGDEYGQELGIRSSIEPAESLGQAVNCWSGMGMSMARNWASSGAASGRKSSWQGENQSQRSIHVPHAVWPFQVKNFSVNMWNAITPLRTSQDHLQENFSNQRIPAQGIRIRSGNILIHAAVMTKPKVKRSKKGPNS*