ENST00000268607.10 MAP1LC3B

Information
Transcript ID
ENST00000268607.10
Genome
hg19
Position
chr16:87,425,942-87,438,380
Strand
+
CDS length
378
Amino acid length
126
Gene symbol
MAP1LC3B
Gene type
protein-coding
Gene description
microtubule associated protein 1 light chain 3 beta
Gene Entrez Gene ID
81631
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 87,425,942 87,426,073
2 87,432,421 87,432,476
3 87,435,781 87,435,887
4 87,436,529 87,438,380
CDS
Exon number Type Start Stop
1 CDS 87,426,034 87,426,073
2 CDS 87,432,421 87,432,476
3 CDS 87,435,781 87,435,887
4 CDS 87,436,529 87,436,703
Other genome
Genome Chromosome Start End Links
hg38 chr16 87,392,336 87,404,774 Link
CDS sequence
ATGCCGTCGGAGAAGACCTTCAAGCAGCGCCGCACCTTCGAACAAAGAGTAGAAGATGTCCGACTTATTCGAGAGCAGCATCCAACCAAAATCCCGGTGATAATAGAACGATACAAGGGTGAGAAGCAGCTTCCTGTTCTGGATAAAACAAAGTTCCTTGTACCTGACCATGTCAACATGAGTGAGCTCATCAAGATAATTAGAAGGCGCTTACAGCTCAATGCTAATCAGGCCTTCTTCCTGTTGGTGAACGGACACAGCATGGTCAGCGTCTCCACACCAATCTCAGAGGTGTATGAGAGTGAGAAAGATGAAGATGGATTCCTGTACATGGTCTATGCCTCCCAGGAGACGTTCGGGATGAAATTGTCAGTGTAA
Amino sequence
MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFGMKLSV*