ENST00000565788.1 MAP1LC3B

Information
Transcript ID
ENST00000565788.1
Genome
hg19
Position
chr16:87,425,940-87,436,215
Strand
+
CDS length
228
Amino acid length
76
Gene symbol
MAP1LC3B
Gene type
protein-coding
Gene description
microtubule associated protein 1 light chain 3 beta
Gene Entrez Gene ID
81631
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 87,425,940 87,426,073
2 87,432,421 87,432,476
3 87,435,781 87,436,215
CDS
Exon number Type Start Stop
1 CDS 87,426,034 87,426,073
2 CDS 87,432,421 87,432,476
3 CDS 87,435,781 87,435,912
Other genome
Genome Chromosome Start End Links
hg38 chr16 87,392,334 87,402,609 Link
CDS sequence
ATGCCGTCGGAGAAGACCTTCAAGCAGCGCCGCACCTTCGAACAAAGAGTAGAAGATGTCCGACTTATTCGAGAGCAGCATCCAACCAAAATCCCGGTGATAATAGAACGATACAAGGGTGAGAAGCAGCTTCCTGTTCTGGATAAAACAAAGTTCCTTGTACCTGACCATGTCAACATGAGTGAGCTCATCAAGATAATTAGGTATTCAGTCACCTTTGTTTCATAA
Amino sequence
MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRYSVTFVS*