ENST00000650688.1 MAP1LC3B

Information
Transcript ID
ENST00000650688.1
Genome
hg19
Position
chr16:87,417,559-87,438,385
Strand
+
CDS length
378
Amino acid length
126
Gene symbol
MAP1LC3B
Gene type
protein-coding
Gene description
microtubule associated protein 1 light chain 3 beta
Gene Entrez Gene ID
81631
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 87,417,559 87,417,802
2 87,425,204 87,426,073
3 87,432,421 87,432,476
4 87,435,781 87,435,887
5 87,436,529 87,438,385
CDS
Exon number Type Start Stop
2 CDS 87,426,034 87,426,073
3 CDS 87,432,421 87,432,476
4 CDS 87,435,781 87,435,887
5 CDS 87,436,529 87,436,703
Other genome
Genome Chromosome Start End Links
hg38 chr16 87,383,953 87,404,779 Link
CDS sequence
ATGCCGTCGGAGAAGACCTTCAAGCAGCGCCGCACCTTCGAACAAAGAGTAGAAGATGTCCGACTTATTCGAGAGCAGCATCCAACCAAAATCCCGGTGATAATAGAACGATACAAGGGTGAGAAGCAGCTTCCTGTTCTGGATAAAACAAAGTTCCTTGTACCTGACCATGTCAACATGAGTGAGCTCATCAAGATAATTAGAAGGCGCTTACAGCTCAATGCTAATCAGGCCTTCTTCCTGTTGGTGAACGGACACAGCATGGTCAGCGTCTCCACACCAATCTCAGAGGTGTATGAGAGTGAGAAAGATGAAGATGGATTCCTGTACATGGTCTATGCCTCCCAGGAGACGTTCGGGATGAAATTGTCAGTGTAA
Amino sequence
MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFGMKLSV*