ENST00000539556.6 CIBAR2
Information
- Transcript ID
- ENST00000539556.6
- Genome
- hg19
- Position
- chr16:85,131,964-85,146,078
- Strand
- -
- CDS length
- 915
- Amino acid length
- 305
- Gene symbol
- CIBAR2
- Gene type
- protein-coding
- Gene description
- CBY1 interacting BAR domain containing 2
- Gene Entrez Gene ID
- 339145
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 85,131,964 | 85,132,952 |
| 8 | 85,133,745 | 85,133,846 |
| 7 | 85,135,820 | 85,135,933 |
| 6 | 85,138,933 | 85,139,037 |
| 5 | 85,141,273 | 85,141,278 |
| 4 | 85,141,452 | 85,141,553 |
| 3 | 85,141,637 | 85,141,705 |
| 2 | 85,143,832 | 85,144,066 |
| 1 | 85,145,939 | 85,146,078 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 9 | CDS | 85,132,791 | 85,132,952 |
| 8 | CDS | 85,133,745 | 85,133,846 |
| 7 | CDS | 85,135,820 | 85,135,933 |
| 6 | CDS | 85,138,933 | 85,139,037 |
| 5 | CDS | 85,141,273 | 85,141,278 |
| 4 | CDS | 85,141,452 | 85,141,553 |
| 3 | CDS | 85,141,637 | 85,141,705 |
| 2 | CDS | 85,143,832 | 85,144,066 |
| 1 | CDS | 85,145,939 | 85,145,958 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr16 | 85,098,358 | 85,112,472 | Link |
CDS sequence
ATGAACATCGTCTTCTCCAGGGACAGCCAGGTGAGGGTGATGGAGAATACCGTGGCCAACACCGAGAAGTACTTTGGGCAGTTCTGCTCGCTGCTGGCCGCCTACACGCGCAAGACGGCCCGGCTGCGGGACAAGGCGGACCAGCTGGTCAAGCAGCTCATCGACTTTGCCAACTCCGAGAACCCCGAGCTGCGGGCCACCATGAGGGGCTTCGCTGAGGACCTGGCCAAAGTGCAGGATTACCGGCAGGCCCAGGTCGAGAGGCTGGAGACCAAGGTGGTCAACCCCCTGAAGCTCTACGGGGCACAGATCAAGCAGACACGGGCTGAGATCAAGAAATTCAAACATGTCCAAAATCATGAGATCAAACAACTGGAAAAACTGGAGAAACTGAGGCAGAAGTCACCCTCGGATCAGCAAATGATCTCCCAGGCAGAGACCAGAGTGCAGAGGGCCGCTGTGGACTCCAGCCGCACCACCCTCCAGCTGGAGGAGACTGTGGATGGCTTCCAGAGGCAGAAGCTCAAGGACCTGCAGAAATTTTTTTGTGACTTTGTAACTATTGAGATGGTTTTCCATGCCAAAGCGGTGGAGGTGTATTCTAGCGCCTTCCAGACCCTGGAGAAGTATGACCTGGAGAGGGATCTACTGGATTTTAGAGCCAAGATGCAAGGAGTTTATGGGCATTATGACACTCGGCTGCTTGCCAACACCAGCCCCCCTCCATCTGTTCTTCAGTCTCTCGCCAGCCAGGGAACTCTGCAGGTCCAGCTGAGTAGGGCAAATGAAGACCCTGAACATCCTCATGCCAATCATGGCAGGTTTAGTCTCTGTGAGTGGGTGGTTAAGGGGCAGCCAGCCCACTGTGTGTGTGGGCAGGGTGGGCATCTCATGCTTCCAGGACATTCTCTCTAA
Amino sequence
MNIVFSRDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQKFFCDFVTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRAKMQGVYGHYDTRLLANTSPPPSVLQSLASQGTLQVQLSRANEDPEHPHANHGRFSLCEWVVKGQPAHCVCGQGGHLMLPGHSL*