ENST00000640173.1 CPHXL2
Information
- Transcript ID
- ENST00000640173.1
- Genome
- hg19
- Position
- chr16:75,694,125-75,710,907
- Strand
- -
- CDS length
- 1,203
- Amino acid length
- 401
- Gene symbol
- CPHXL2
- Gene type
- protein-coding
- Gene description
- cytoplasmic polyadenylated homeobox like 2
- Gene Entrez Gene ID
- 112268164
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 3 | 75,694,125 | 75,695,147 |
| 2 | 75,703,261 | 75,703,454 |
| 1 | 75,710,885 | 75,710,907 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 75,694,152 | 75,695,147 |
| 2 | CDS | 75,703,261 | 75,703,454 |
| 1 | CDS | 75,710,885 | 75,710,897 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr16 | 75,660,227 | 75,677,009 | Link |
CDS sequence
ATGTCTTCCCAAGCTTTCCCAGCTGAAGAGGATCATCATAATGAAGAAAGACAAACAAAGAAAAAAAGAAAAACAAAACACCGACATAAATTTTCTGAAGAATTATTGCAGGAACTTAAGGAAATATTTGGAGAGAACGGTTATCCTGATTTCACCACTAGGAAAACACTGGCCAACAAATTTGATTGTCCGGTTAACGTGATAAACAACTGGTTCCAGAACAATAGAGCCAGACTTCCACCGGAAGAAAGACAAAGAATATTTCTTACTTGGAAAAAACACGATTTCCCAGTCCAAGCCTGTCCATTTTTAAGCCTCCAGGAAACCCAGGCTGCAGCTTCCAACTATGCCACAGAGCAGAGTTTTTCCTGTGCCAAGAGGGCTCTGATGAGAAGACCTGGTTGCTCCCTTCTGGAGAAACAGAGGATTGCCTGTCAACAGATGGGCTACAATTGCTTCTCTTTGGAGAACCAAGAGACTCCCAGTCAACAGGTGGGCTCCATGTGCTCTTCTCTGGAGAAACAAGGGATTCCCAGTCAACAGGTGGGTTCCCAGTGCTCCTATCTGGTCGCAGGTACTGAAAAGCATCCAGGCTATGCTTTGGAGTATGGAGGTGACACAGGAAGTGAGCATTCTACTGCCTATCGTTTTCTCAGCTACAACTCTGCAGAATGCCTTCATCCTCCCCCATCTTCTGTGCCATATTTTCATGGAGAAAGGACTGAAACCAGGGAAAGCCAGCATGCAAGTCCCTTCCTTTTGGATTACGCTCAAGGTGCTTACGGGGTGAAGAAAGACCATTGTCTTTGCTCATTCTGTCTCTCACTGCTGCAAGAACAGCAGCAGAATGATTGGCAGTATCACCCACAGCAGCACCAACAGCCTCAGAATTACTCAGAGGGGATGATGTTGCAGGAACAGCTGCCAATGGACTCGGGTCCTTGGGATCTAGAGAAGCAGTGGCCCTCGGCTCAGTCACAGCTGCAGAGTCAACTGCCTCAGAATAATGGAAAGCCGTTGTGCTCTCAACTGCAGCACGTGCCTCCCCAAATAGCTGCCAACTCACCCCTGCTGCCTCTGGGGCAAGATATGCAGGTAGGGGCTTCAAGCAACTCAGGACTCAAATGCAGCAGTTTTAGGTTGAGGGGTCTACACGGGCCTGCCACAGGAACCCAAGGATGCAGCTTTGCAAAGTATTGCTAA
Amino sequence
MSSQAFPAEEDHHNEERQTKKKRKTKHRHKFSEELLQELKEIFGENGYPDFTTRKTLANKFDCPVNVINNWFQNNRARLPPEERQRIFLTWKKHDFPVQACPFLSLQETQAAASNYATEQSFSCAKRALMRRPGCSLLEKQRIACQQMGYNCFSLENQETPSQQVGSMCSSLEKQGIPSQQVGSQCSYLVAGTEKHPGYALEYGGDTGSEHSTAYRFLSYNSAECLHPPPSSVPYFHGERTETRESQHASPFLLDYAQGAYGVKKDHCLCSFCLSLLQEQQQNDWQYHPQQHQQPQNYSEGMMLQEQLPMDSGPWDLEKQWPSAQSQLQSQLPQNNGKPLCSQLQHVPPQIAANSPLLPLGQDMQVGASSNSGLKCSSFRLRGLHGPATGTQGCSFAKYC*